Return to main results Retrieve Phyre Job Id

Job DescriptionP45394
Confidence1.73%DateThu Jan 5 12:02:31 GMT 2012
Rank83Aligned Residues14
% Identity7%Templatec2vi6F_
PDB info PDB header:transcriptionChain: F: PDB Molecule:homeobox protein nanog; PDBTitle: crystal structure of the nanog homeodomain
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40
Predicted Secondary structure 



Query SS confidence 













Query Sequence  SILCRTFGIPPLII
Query Conservation    
    

     
Alig confidence 













Template Conservation    

  


    
Template Sequence  QELSSILNLSYKQV
Template Known Secondary structure  T

Template Predicted Secondary structure 


Template SS confidence 













   32.......40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions