 |
| Job Description | P45394 | | Confidence | 2.62% | Date | Thu Jan 5 12:02:31 GMT 2012 |
| Rank | 39 | Aligned Residues | 28 |
| % Identity | 7% | Template | c2k1aA_ |
| PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:integrin alpha-iib; |
PDBTitle: bicelle-embedded integrin alpha(iib) transmembrane segment
|
| Resolution | UNK |
|
| | |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
| Predicted Secondary structure | |
|
|
|
|
|  | | | | | | | | | | | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | P | R | D | G | G | L | P | V | A | F | L | W | L | G | I | A | L | I | I | M | P | V | A | T | R | M | V |
| Query Conservation | |
| | | | | | | | | |
| | |
| | | | | | |
| | | |
| | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | |
|
| |
|
|
|
|
|
|
|
| |
|
|
|
|
| | |
|
| | |
|
| Template Sequence | |
E | E | R | A | I | P | I | W | W | V | L | V | G | V | L | G | G | L | L | L | L | T | I | L | V | L | A | M |
| Template Known Secondary structure | |
S |
|
|
|
|
| | | | | | | | | | | | | | | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
| | | | | | | | | | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
