 |
Job Description | P0ABR1 | Confidence | 4.73% | Date | Thu Jan 5 11:16:06 GMT 2012 |
Rank | 80 | Aligned Residues | 38 |
% Identity | 16% | Template | c3pq1A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:poly(a) rna polymerase; |
PDBTitle: crystal structure of human mitochondrial poly(a) polymerase (papd1)
|
Resolution | 3.10 Å |
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | D | A | L | A | G | E | L | S | R | R | I | Q | Y | A | F | P | D | N | E | G | H | V | S | V | R | Y | A | A | A | N | N | L | S | V | I | G | A | T |
Query Conservation |   |
  |   |   |
|
|   |   |
|
|   |
|
|
|   |   |   |
|
|
|   |   |   |   |
|
|
|   |   |
|
|   |   |   |
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|   | . | . |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|
Template Sequence |   |
L | R | Y | L | T | C | S | L | I | E | D | X | A | A | A | Y | F | P | D | . |
. |
C | I | V | R | P | F | G | S | S | V | N | T | F | G | K | L | G | C | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | T | T | . | . |
|  |  |  |  |  | G | G | G | T | S | S |
|
| B | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |
|
. | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|