 |
Job Description | P0A962 | Confidence | 21.58% | Date | Thu Jan 5 11:09:27 GMT 2012 |
Rank | 184 | Aligned Residues | 84 |
% Identity | 20% | Template | c3qvjB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:putative hydantoin racemase; |
PDBTitle: allantoin racemase from klebsiella pneumoniae
|
Resolution | 2.10 Å |
|
 |
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Y | I | P | V | S | G | H | L | Q | R | Q | L | A | L | M | P | E | F | H | R | P | E | M | P | D | F | T | I | H | E | Y | T | P | L | M | D | S | S | D | M | . |
. |
T | P | E | D | W | Q | H | I | A | E | D | I | K | A | H | Y | . |
. |
. |
. |
. |
D | D | Y | D | G | F | V | I | L | H | G | T | D | T | M | A |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   | . | . |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   | . | . | . | . | . |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|   |   | . | . |
Template Sequence |   |
Q | V | I | N | P | N | T | S | L | A | X | T | E | T | I | G | A | A | A | R | A | V | A | A | P | G | T | E | I | L | A | V | C | P | . |
R | A | G | V | P | S | I | E | G | H | F | D | E | A | I | A | A | V | G | V | L | E | Q | I | R | A | G | R | E | Q | G | V | D | G | H | V | I | A | C | F | G | D | P | . |
. |
Template Known Secondary structure |   |
 |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |
|
| . | S | S | S |
| S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| S | T | T |
| T | . | . |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
  |
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | T | A | S | A | L | S | F | M | L | E | N | L | G | K | P | V | I |
Query Conservation |   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |   |
|   |   |
|
|   |   |   |   |
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
G | L | L | A | A | R | E | L | A | Q | G | P | V | I |
Template Known Secondary structure |   |
. | . | . | . | T |  |  |  |  |  |  |  |
| S | S |
|  |  |
Template Predicted Secondary structure |   |
. | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|