Job Description P0A962 Confidence 43.82% Date Thu Jan 5 11:09:27 GMT 2012 Rank 83 Aligned Residues 96 % Identity 9% Template c3ojcD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative aspartate/glutamate racemase; PDBTitle: crystal structure of a putative asp/glu racemase from yersinia pestis Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		K	K	S	I	Y	V	A	Y	T	G	G	T	I	G	M	Q	R	S	E	Q	G	Y	I	P	V	S	G	H	L	Q	R	Q	L	A	L	M	P	E	F	H	R	P	E	M	P	D	F	T	I	H	E	Y	T	P	L	M	D	S	S	D	M	.	.	.	.	T	P	E	D	W	Q	H	I	A	E	D	I	K	A	H
Query Conservation																																																															.	.	.	.
Alig confidence									.	.			.	.	.	.	.	.	.	.																																											.	.	.	.
Template Conservation									.	.			.	.	.	.	.	.	.	.
Template Sequence		X	K	I	L	G	L	I	.	.	G	G	.	.	.	.	.	.	.	.	X	S	W	E	S	T	I	P	Y	Y	R	X	I	N	Q	H	V	K	A	Q	L	G	G	L	H	S	A	K	I	I	L	Y	S	V	D	F	H	E	I	E	Q	L	Q	A	K	G	D	W	Q	T	A	A	Q	L	L	S	N	A	A	I	S
Template Known Secondary structure									.	.			.	.	.	.	.	.	.	.	T	T																					T	T																					T	T
Template Predicted Secondary structure									.	.			.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.			.	10									.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		79	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		Y	D	.	.	D	Y	D	G	F	V	I	L	H	G	T	D	T	M	A	Y	T	A	S	A	L	S	F	M	L	E	N	L	G	K	P	V	I
Query Conservation				.	.
Alig confidence				.	.														.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		L	K	H	A	G	A	E	V	I	V	V	C	T	N	T	X	H	.	.	.	.	.	K	V	A	D	D	I	E	A	A	C	G	L	P	L	L
Template Known Secondary structure						T							S	S	S	G	G	G	.	.	.	.	.	G	G									T	S		B
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions