Job Description P0A962 Confidence 35.47% Date Thu Jan 5 11:09:27 GMT 2012 Rank 112 Aligned Residues 64 % Identity 22% Template c3gdwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma-54 interaction domain protein; PDBTitle: crystal structure of sigma-54 interaction domain protein from2 enterococcus faecalis Resolution 2.00 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	I	L	H	G	T	D	T	M	A	Y	T	A	S	A	L	S	F	M	L	E	N	L	G	K	P	V	I	V	T	G	S	Q	I	P	L	A	E	L	R	S	D	G	Q	I	N	L	L	N	A	L	Y	V	A	A	N	Y	P	I	N	E	V	T	L	F	F	N
Query Conservation
Alig confidence																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		F	V	L	X	H	G	D	S	T	A	S	S	X	L	K	T	A	Q	E	L	L	G	T	.	.	.	.	S	I	G	T	A	X	N	X	P	L	T	X	E	V	Q	T	X	Y	E	Q	L	R	N	Q	V	I	T	Q	K	E	S	L	N	N	G	I	L	L	L	T	D
Template Known Secondary structure							S	S	S														T		.	.	.	.										T	T	S															T	S	T	G	G	G	T	T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570					.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions