Job Description P0A962 Confidence 54.21% Date Thu Jan 5 11:09:27 GMT 2012 Rank 50 Aligned Residues 62 % Identity 13% Template c3brsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein/laci transcriptional regulator; PDBTitle: crystal structure of sugar transporter from clostridium2 phytofermentans Resolution 2.00 Å

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		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		D	V	V	R	N	F	L	R	Q	P	V	K	A	L	I	L	R	S	Y	G	V	G	N	A	P	Q	N	K	A	F	L	Q	E	L	Q	E	A	S	D	R	G	I	V	V	V	N	L	T	Q	C	M	.	.	.	.	.	S	G	K	V	N	M	G	G	Y	A	T	G	N	A	L	A	H
Query Conservation																																																					.	.	.	.	.
Alig confidence																										.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		E	L	I	E	E	A	I	K	R	K	P	D	V	I	L	L	A	A	A	D	Y	E	K	T	.	.	.	.	.	.	Y	D	A	A	K	E	I	K	D	A	G	I	K	L	I	V	I	D	S	G	M	K	Q	D	I	A	D	I	T	V	A	T	D	N	I	Q	A	G	I	R	I	G	A
Template Known Secondary structure										T			S							S		T	T	T	T	.	.	.	.	.	.					T	T	T	G	G	G	T							S	S			S	S				S
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions