 |
| Job Description | P0A8X0 | | Confidence | 3.33% | Date | Thu Jan 5 11:08:53 GMT 2012 |
| Rank | 76 | Aligned Residues | 20 |
| % Identity | 35% | Template | c2a8vA_ |
| PDB info |
PDB header:protein/rna | Chain: A: PDB Molecule:rna binding domain of rho transcription |
PDBTitle: rho transcription termination factor/rna complex
|
| Resolution | 2.40 Å |
|
| | |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
D | D | I | E | D | E | D | D | E | I | I | W | V | S | K | S | E | I | K | R |
| Query Conservation | |
| | | |
| |
| |
| | | | |
|
|
|
| |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
| | | | | |
|
|
|
|
| |
| |
|
|
|
| Template Sequence | |
D | S | S | Y | L | A | G | P | D | D | I | Y | V | S | P | S | Q | I | R | R |
| Template Known Secondary structure | |
T | T | T | T | S |
|
| T | T |
|  | |  |
| | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
