Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8X0
Confidence3.10%DateThu Jan 5 11:08:53 GMT 2012
Rank97Aligned Residues28
% Identity25%Templatec1vf6B_
PDB info PDB header:protein binding/protein transportChain: B: PDB Molecule:pals1-associated tight junction protein; PDBTitle: 2.1 angstrom crystal structure of the pals-1-l27n and patj2 l27 heterodimer complex
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140
Predicted Secondary structure 


Query SS confidence 



























Query Sequence  VLFHKLENLRDRLIDQGDDAIAEVLNLW
Query Conservation     
 

 





   
 

 
     
Alig confidence 



























Template Conservation 


  




 

   

    
 
  
Template Sequence  QVLQVLDRLKMKLQEKGDTSQNEKLSMF
Template Known Secondary structure  TT

TT
Template Predicted Secondary structure 




Template SS confidence 



























   11........20.........30........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions