Job Description P0A8G3 Confidence 100.00% Date Thu Jan 5 11:07:46 GMT 2012 Rank 1 Aligned Residues 465 % Identity 66% Template c3iacA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glucuronate isomerase; PDBTitle: 2.2 angstrom crystal structure of glucuronate isomerase from2 salmonella typhimurium. Resolution 2.22 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		P	F	M	T	E	D	F	L	L	D	T	E	F	A	R	R	L	Y	H	D	Y	A	K	D	Q	P	I	F	D	Y	H	C	H	L	P	P	Q	Q	I	A	E	D	Y	R	F	K	N	L	Y	D	I	W	L	K	G	D	H	Y	K	W	R	A	M	R	T	N	G	V	A	E	R	L	C	T	G	.	D	A	S	D
Query Conservation																																																																													.
Alig confidence																																																																													.
Template Conservation
Template Sequence		T	F	X	T	E	D	F	L	L	K	N	D	I	A	R	T	L	Y	H	K	Y	A	A	P	X	P	I	Y	D	F	H	C	H	L	S	P	Q	E	I	A	D	D	R	R	F	D	N	L	G	Q	I	W	L	E	G	D	H	Y	K	W	R	A	L	R	S	A	G	V	D	E	S	L	I	T	G	K	E	T	S	D
Template Known Secondary structure			S	S		T	T	T	T			S										T	T	T	T	S						S											T				S								S	S		S									T	T			G	G	G	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		R	E	K	F	D	A	W	A	A	T	V	P	H	T	I	G	N	P	L	Y	H	W	T	H	L	E	L	R	R	P	F	G	I	T	G	K	L	L	.	S	P	S	T	A	D	E	I	W	N	E	C	N	E	L	L	A	Q	D	N	F	S	A	R	G	I	M	Q	Q	M	N	V	K	M	V	G	T	T	D	D	P
Query Conservation																																								.
Alig confidence																																				.				.
Template Conservation																																				.
Template Sequence		Y	E	K	Y	X	A	W	A	N	T	V	P	K	T	L	G	N	P	L	Y	H	W	T	H	L	E	L	R	R	P	F	G	I	T	.	G	T	L	F	G	P	D	T	A	E	S	I	W	T	Q	C	N	E	K	L	A	T	P	A	F	S	A	R	G	I	X	Q	Q	X	N	V	R	X	V	G	T	T	D	D	P
Template Known Secondary structure												G	G	G		T	T	S												T	T	T				.	S				S																T	S	G	G	G	S								T	T								B		T
Template Predicted Secondary structure																																				.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	S	L	E	H	H	A	E	I	A	K	D	G	S	F	T	I	K	V	L	P	S	W	R	P	D	K	A	F	N	I	E	Q	A	T	F	N	D	Y	M	A	K	L	G	E	V	S	D	T	D	I	R	R	F	A	D	L	Q	T	A	L	T	K	R	L	D	H	F	A	A	H	G	C	K	V	S	D	H	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	S	L	E	Y	H	R	Q	I	A	A	D	D	S	I	D	I	E	V	A	P	S	W	R	P	D	K	V	F	K	I	E	L	D	G	F	V	D	Y	L	R	K	L	E	A	A	A	D	V	S	I	T	R	F	D	D	L	R	Q	A	L	T	R	R	L	D	H	F	A	A	C	G	C	R	A	S	D	H	G
Template Known Secondary structure		T													T	T			S						B								T	T	S	T	T													T				S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		241	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	D	V	V	M	F	A	E	A	.	N	E	A	E	L	D	S	I	L	A	R	R	L	A	G	E	T	L	S	E	H	E	V	A	Q	F	K	T	A	V	L	V	F	L	G	A	E	Y	A	R	R	G	W	V	Q	Q	Y	H	I	G	A	L	R	N	N	N	L	R	Q	F	K	L	L	G	P	D	V	G	F	D
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		I	E	T	L	R	F	A	P	V	P	D	D	A	Q	L	D	A	I	L	G	K	R	L	A	G	E	T	L	S	E	L	E	I	A	Q	F	T	T	A	V	L	V	W	L	G	R	Q	Y	A	A	R	G	W	V	X	Q	L	H	I	G	A	I	R	N	N	N	T	R	X	F	R	L	L	G	P	D	T	G	F	D
Template Known Secondary structure			S	S																					T	T																											T																							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	N	D	R	P	M	A	E	E	L	S	K	L	L	S	K	Q	N	E	E	N	L	L	P	K	T	I	L	Y	C	L	N	P	R	D	N	E	V	L	G	T	M	I	G	N	F	Q	G	E	G	M	P	G	K	M	Q	F	G	S	G	W	W	F	N	D	Q	K	D	G	M	E	R	Q	M	T	Q	L	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	G	D	N	N	I	S	W	A	L	S	R	L	L	D	S	X	D	V	T	N	E	L	P	K	T	I	L	Y	C	L	N	P	R	D	N	E	V	L	A	T	X	I	G	N	F	Q	G	P	G	I	A	G	K	V	Q	F	G	S	G	W	W	F	N	D	Q	K	D	G	X	L	R	Q	L	E	Q	L	S	Q
Template Known Secondary structure																					T	T	T										S	S	G	G	G								G	G	G	S			T	T	S	T	T	S								G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	L	S	R	F	V	G	M	L	T	D	S	R	S	F	L	S	Y	T	R	H	E	Y	F	R	R	I	L	C	Q	M	I	G	R	W	V	E	A	G	E	A	P	A	D	I	N	L	L	G	E	M	V	K	N	I	C	F	N	N	A	R	D	Y	F	A	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	G	L	L	S	Q	F	V	G	X	L	T	D	S	R	S	F	L	S	Y	T	R	H	E	Y	F	R	R	I	L	C	N	L	L	G	Q	W	A	Q	D	G	E	I	P	D	D	E	A	X	L	S	R	X	V	Q	D	I	C	F	N	N	A	Q	R	Y	F	T	I	K
Template Known Secondary structure			S		G	G	G									S		T	T	T	T																				T	T	S	S																T							T	S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470