Email l.a.kelley@imperial.ac.uk Description P02929 Date Thu Jan 5 10:57:41 GMT 2012 Unique Job ID dd13c5ac9b59d242

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1xx3A_ 99.8 100 PDB header:transport protein Chain: A: PDB Molecule:tonb protein; PDBTitle: solution structure of escherichia coli tonb-ctd 2 d1u07a_ 99.8 100 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 3 c2grxC_ 99.8 100 PDB header:metal transport Chain: C: PDB Molecule:protein tonb; PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome 4 d2gskb1 99.8 100 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 5 d1ihra_ 99.7 100 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 6 c2k9kA_ 99.7 31 PDB header:metal transport Chain: A: PDB Molecule:tonb2; PDBTitle: molecular characterization of the tonb2 protein from vibrio2 anguillarum 7 d1lr0a_ 99.4 22 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TolA 8 c2x9aB_ 99.2 11 PDB header:viral protein Chain: B: PDB Molecule:membrane spanning protein, required for outer membrane PDBTitle: crystal structure of g3p from phage if1 in complex with its2 coreceptor, the c-terminal domain of tola 9 d1tola2 99.1 10 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TolA 10 c1tolA_ 98.7 10 PDB header:viral protein Chain: A: PDB Molecule:protein (fusion protein consisting of minor coat PDBTitle: fusion of n-terminal domain of the minor coat protein from2 gene iii in phage m13, and c-terminal domain of e. coli3 protein-tola 11 c1ybxA_ 64.2 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: conserved hypothetical protein cth-383 from clostridium thermocellum 12 c3onrI_ 60.8 21 PDB header:metal binding protein Chain: I: PDB Molecule:protein transport protein sece2; PDBTitle: crystal structure of the calcium chelating immunodominant antigen,2 calcium dodecin (rv0379),from mycobacterium tuberculosis with a novel3 calcium-binding site 13 c2h66G_ 60.0 9 PDB header:structural genomics/oxidoreductase Chain: G: PDB Molecule:pv-pf14_0368; PDBTitle: the crystal structure of plasmodium vivax 2-cys2 peroxiredoxin 14 c3kebB_ 57.6 6 PDB header:oxidoreductase Chain: B: PDB Molecule:probable thiol peroxidase; PDBTitle: thiol peroxidase from chromobacterium violaceum 15 d1j8ba_ 57.6 17 Fold:YbaB-like Superfamily:YbaB-like Family:YbaB-like 16 d1puga_ 52.2 22 Fold:YbaB-like Superfamily:YbaB-like Family:YbaB-like 17 d2cv4a1 50.7 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 18 c3drnB_ 47.4 20 PDB header:oxidoreductase Chain: B: PDB Molecule:peroxiredoxin, bacterioferritin comigratory protein PDBTitle: the crystal structure of bcp1 from sulfolobus sulfataricus 19 d2ux9a1 45.5 25 Fold:Dodecin subunit-like Superfamily:Dodecin-like Family:Dodecin-like 20 d1we0a1 43.6 21 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 21 d1zyea1 not modelled 42.8 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 22 d2h01a1 not modelled 41.6 9 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 23 c2vxaL_ not modelled 40.3 32 PDB header:flavoprotein Chain: L: PDB Molecule:dodecin; PDBTitle: h.halophila dodecin in complex with riboflavin 24 d1e2ya_ not modelled 38.3 19 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 25 c2bmxB_ not modelled 36.4 17 PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxidase c; PDBTitle: mycobacterium tuberculosis ahpc 26 d1qq2a_ not modelled 33.8 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 27 d1qmva_ not modelled 33.5 9 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 28 c3hd7A_ not modelled 31.6 15 PDB header:exocytosis Chain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1 29 d1n8ja_ not modelled 31.4 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 30 c3oqtP_ not modelled 31.1 14 PDB header:flavoprotein Chain: P: PDB Molecule:rv1498a protein; PDBTitle: crystal structure of rv1498a protein from mycobacterium tuberculosis 31 d1uula_ not modelled 30.9 9 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 32 d1m98a2 not modelled 30.5 23 Fold:Cystatin-like Superfamily:NTF2-like Family:Orange carotenoid protein, C-terminal domain 33 c3dtdI_ not modelled 29.6 22 PDB header:structural genomics, unknown function Chain: I: PDB Molecule:invasion-associated protein b; PDBTitle: crystal structure of invasion associated protein b from bartonella2 henselae 34 d1psqa_ not modelled 29.1 12 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 35 d1xvqa_ not modelled 29.0 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 36 c2ii1A_ not modelled 28.7 17 PDB header:hydrolase Chain: A: PDB Molecule:acetamidase; PDBTitle: crystal structure of acetamidase (10172637) from bacillus halodurans2 at 1.95 a resolution 37 c2kzxA_ not modelled 28.7 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of a3dht5 from clostridium thermocellum,2 northeast structural genomics consortium target cmr116 38 c2yzhD_ not modelled 26.1 24 PDB header:oxidoreductase Chain: D: PDB Molecule:probable thiol peroxidase; PDBTitle: crystal structure of peroxiredoxin-like protein from aquifex aeolicus 39 c2xpdC_ not modelled 25.3 6 PDB header:oxidoreductase Chain: C: PDB Molecule:thiol peroxidase; PDBTitle: reduced thiol peroxidase (tpx) from yersinia pseudotuberculosis 40 d1ijda_ not modelled 24.5 21 Fold:Light-harvesting complex subunits Superfamily:Light-harvesting complex subunits Family:Light-harvesting complex subunits 41 d2cx4a1 not modelled 23.6 24 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 42 d1nkza_ not modelled 22.1 17 Fold:Light-harvesting complex subunits Superfamily:Light-harvesting complex subunits Family:Light-harvesting complex subunits 43 d2bmxa1 not modelled 21.9 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 44 d2vnud4 not modelled 21.3 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:RNB domain-like 45 c2c0dA_ not modelled 20.9 11 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin peroxidase 2; PDBTitle: structure of the mitochondrial 2-cys peroxiredoxin from2 plasmodium falciparum 46 d1zofa1 not modelled 20.7 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 47 c3o6uB_ not modelled 20.4 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein cpe2226; PDBTitle: crystal structure of cpe2226 protein from clostridium perfringens.2 northeast structural genomics consortium target cpr195 48 c2r7fA_ not modelled 18.9 27 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease ii family protein; PDBTitle: crystal structure of ribonuclease ii family protein from deinococcus2 radiodurans, hexagonal crystal form. northeast structural genomics3 target drr63 49 d2r7da2 not modelled 18.4 27 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:RNB domain-like 50 c3lwxA_ not modelled 18.1 9 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh:ubiquinone oxidoreductase, na translocating, PDBTitle: crystal structure of na(+)-translocating nadh-quinone2 reductase subunit c (yp_001302508.1) from parabacteroides3 distasonis atcc 8503 at 1.10 a resolution 51 d1knga_ not modelled 18.0 12 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 52 c1zyeL_ not modelled 17.9 15 PDB header:oxidoreductase Chain: L: PDB Molecule:thioredoxin-dependent peroxide reductase; PDBTitle: crystal strucutre analysis of bovine mitochondrial peroxiredoxin iii 53 c2egtA_ not modelled 15.5 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein aq_1549; PDBTitle: crystal structure of hypothetical protein (aq1549) from aquifex2 aeolicus 54 c2jszA_ not modelled 14.8 15 PDB header:oxidoreductase Chain: A: PDB Molecule:probable thiol peroxidase; PDBTitle: solution structure of tpx in the reduced state 55 d1pugb_ not modelled 13.8 22 Fold:YbaB-like Superfamily:YbaB-like Family:YbaB-like 56 c3eytA_ not modelled 13.6 6 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein spoa0173; PDBTitle: crystal structure of thioredoxin-like superfamily protein spoa0173 57 c1h2aL_ not modelled 12.8 30 PDB header:oxidoreductase Chain: L: PDB Molecule:hydrogenase; PDBTitle: single crystals of hydrogenase from desulfovibrio vulgaris 58 d1iwla_ not modelled 12.7 10 Fold:LolA-like prokaryotic lipoproteins and lipoprotein localization factors Superfamily:Prokaryotic lipoproteins and lipoprotein localization factors Family:Outer-membrane lipoproteins carrier protein LolA 59 c2ywnA_ not modelled 12.3 7 PDB header:oxidoreductase Chain: A: PDB Molecule:peroxiredoxin-like protein; PDBTitle: crystal structure of peroxiredoxin-like protein from2 sulfolobus tokodaii 60 c1zofB_ not modelled 11.1 12 PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide-reductase; PDBTitle: crystal structure of alkyl hydroperoxide-reductase (ahpc)2 from helicobacter pylori 61 d2idla1 not modelled 11.0 14 Fold:eIF1-like Superfamily:TM1457-like Family:TM1457-like 62 d1xvwa1 not modelled 10.9 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 63 d2zcta1 not modelled 10.7 12 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 64 d1wuil1 not modelled 10.5 31 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 65 c3mjjD_ not modelled 10.3 19 PDB header:hydrolase Chain: D: PDB Molecule:predicted acetamidase/formamidase; PDBTitle: crystal structure analysis of a recombinant predicted2 acetamidase/formamidase from the thermophile thermoanaerobacter3 tengcongensis 66 c2b7kD_ not modelled 10.1 6 PDB header:metal binding protein Chain: D: PDB Molecule:sco1 protein; PDBTitle: crystal structure of yeast sco1 67 d2ix0a4 not modelled 9.6 18 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:RNB domain-like 68 d1xcca_ not modelled 9.5 10 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 69 c3myrB_ not modelled 9.2 18 PDB header:oxidoreductase Chain: B: PDB Molecule:nickel-dependent hydrogenase large subunit; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state 70 c2fug4_ not modelled 8.9 8 PDB header:oxidoreductase Chain: 4: PDB Molecule:nadh-quinone oxidoreductase chain 4; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 71 d2fug41 not modelled 8.9 8 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nqo4-like 72 c3gknA_ not modelled 8.6 26 PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: insights into the alkyl peroxide reduction activity of xanthomonas2 campestris bacterioferritin comigratory protein from the trapped3 intermediate/ligand complex structures 73 c1vqzA_ not modelled 8.6 21 PDB header:ligase Chain: A: PDB Molecule:lipoate-protein ligase, putative; PDBTitle: crystal structure of a putative lipoate-protein ligase a (sp_1160)2 from streptococcus pneumoniae tigr4 at 1.99 a resolution 74 c2vnuD_ not modelled 8.2 14 PDB header:hydrolase/rna Chain: D: PDB Molecule:exosome complex exonuclease rrp44; PDBTitle: crystal structure of sc rrp44 75 c2kl8A_ not modelled 8.1 22 PDB header:de novo protein Chain: A: PDB Molecule:or15; PDBTitle: solution nmr structure of de novo designed ferredoxin-like2 fold protein, northeast structural genomics consortium3 target or15 76 c3kh7A_ not modelled 7.9 6 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbe; PDBTitle: crystal structure of the periplasmic soluble domain of reduced ccmg2 from pseudomonas aeruginosa 77 c3razA_ not modelled 7.8 15 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin-related protein; PDBTitle: the crystal structure of thioredoxin-related protein from neisseria2 meningitidis serogroup b 78 d2b7ka1 not modelled 7.7 6 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 79 d1yexa1 not modelled 7.6 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 80 c2kncA_ not modelled 7.4 19 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 81 d1qxha_ not modelled 7.4 12 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 82 d1xrda1 not modelled 7.2 16 Fold:Light-harvesting complex subunits Superfamily:Light-harvesting complex subunits Family:Light-harvesting complex subunits 83 c2nr1A_ not modelled 7.2 39 PDB header:receptor Chain: A: PDB Molecule:nr1 m2; PDBTitle: transmembrane segment 2 of nmda receptor nr1, nmr, 102 structures 84 d1rjlc_ not modelled 7.1 31 Fold:open-sided beta-meander Superfamily:Outer surface protein Family:Outer surface protein 85 d1yq9h1 not modelled 6.9 30 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 86 c2v1mA_ not modelled 6.9 15 PDB header:oxidoreductase Chain: A: PDB Molecule:glutathione peroxidase; PDBTitle: crystal structure of schistosoma mansoni glutathione2 peroxidase 87 d1q98a_ not modelled 6.1 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 88 d1frfl_ not modelled 6.1 30 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 89 c3f8xD_ not modelled 6.0 7 PDB header:isomerase Chain: D: PDB Molecule:putative delta-5-3-ketosteroid isomerase; PDBTitle: crystal structure of a putative delta-5-3-ketosteroid isomerase2 (eca2236) from pectobacterium atrosepticum scri1043 at 1.55 a3 resolution 90 d1e3db_ not modelled 5.8 25 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 91 c2boyC_ not modelled 5.7 12 PDB header:oxidoreductase Chain: C: PDB Molecule:3-chlorocatechol 1,2-dioxygenase; PDBTitle: crystal structure of 3-chlorocatechol 1,2-dioxygenase from2 rhodococcus opacus 1cp 92 c3fljA_ not modelled 5.3 3 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein conserved in bacteria with a PDBTitle: crystal structure of uncharacterized protein conserved in bacteria2 with a cystatin-like fold (yp_168589.1) from silicibacter pomeroyi3 dss-3 at 2.00 a resolution 93 c2qtsA_ not modelled 5.1 8 PDB header:membrane protein Chain: A: PDB Molecule:acid-sensing ion channel; PDBTitle: structure of an acid-sensing ion channel 1 at 1.9 a resolution and low2 ph 94 c2wpnB_ not modelled 5.0 33 PDB header:oxidoreductase Chain: B: PDB Molecule:periplasmic [nifese] hydrogenase, large subunit, PDBTitle: structure of the oxidised, as-isolated nifese hydrogenase2 from d. vulgaris hildenborough 95 c2rliA_ not modelled 5.0 19 PDB header:metal transport Chain: A: PDB Molecule:sco2 protein homolog, mitochondrial; PDBTitle: solution structure of cu(i) human sco2 96 d3bzka5 not modelled 5.0 5 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Tex RuvX-like domain-like