PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3lwxA_

Fold library id	PDB Header	Molecule	Title
c3lwxA_	PDB header: oxidoreductase	Chain: A: PDB Molecule: nadh:ubiquinone oxidoreductase, na translocating,	PDBTitle: crystal structure of na(+)-translocating nadh-quinone2 reductase subunit c (yp_001302508.1) from parabacteroides3 distasonis atcc 8503 at 1.10 a resolution

Links to external resources
Added to library: Sat Aug 28 18:37:05 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G Q S L R S F Q K Q N E D N D K R Q Q I L R S I N V N V S S S E A E T K Y N E L I K E A F L V N E N G E K V E G D A F A T D V V K A A T E H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S
S S
T T T S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q Y P V F V A N V D G Q P K Y I X A L H G A G L W G P L W G Y I S V D S D K N T I Y G A D F S H Q G E T P G L G A E I S K P V F S N E F K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S
T T S S B S S
T T T G G G G G S G G G T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . .

Sequence K K I F X S G E F K S V A V V K P G K S V A G Q D Y V D G I S G G T I T S K G V D E X L F N S L S G Y V K F L T S Q N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S T T
S T T
T T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	Q	S	L	R	S	F	Q	K	Q	N	E	D	N	D	K	R	Q	Q	I	L	R	S	I	N	V	N	V	S	S	S	E	A	E	T	K	Y	N	E	L	I	K	E	A	F	L	V	N	E	N	G	E	K	V	E	G	D	A	F	A	T	D	V	V	K	A	A	T	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T																								T	T	S				S	S		T	T	T	S								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	Y	P	V	F	V	A	N	V	D	G	Q	P	K	Y	I	X	A	L	H	G	A	G	L	W	G	P	L	W	G	Y	I	S	V	D	S	D	K	N	T	I	Y	G	A	D	F	S	H	Q	G	E	T	P	G	L	G	A	E	I	S	K	P	V	F	S	N	E	F	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T													S	S	S										T	T	S	S	B									S	S			T	T	T	G	G	G	G	G	S					G	G	G	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Sequence	K	K	I	F	X	S	G	E	F	K	S	V	A	V	V	K	P	G	K	S	V	A	G	Q	D	Y	V	D	G	I	S	G	G	T	I	T	S	K	G	V	D	E	X	L	F	N	S	L	S	G	Y	V	K	F	L	T	S	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	S			T	T									S	T	T				T	T	S							T	T