Return to main results Retrieve Phyre Job Id

Job DescriptionP02929
Confidence64.15%DateThu Jan 5 10:57:41 GMT 2012
Rank11Aligned Residues36
% Identity11%Templatec1ybxA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: conserved hypothetical protein cth-383 from clostridium thermocellum
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   178.180.........190....... ..200.........210...
Predicted Secondary structure 






....


Query SS confidence 



















. . . .















Query Sequence  VKFDVTPDGRVDNVQILSAK. . . . PANMFEREVKNAMRRW
Query Conservation 
   
   
 
    
  

....
   

 

  

 
 
Alig confidence 



















....















Template Conservation 
 


 
 
 
  
 

       
 
 
  

  
 
 
Template Sequence  VTVVATGRKDIKEITIKPEVVDPDDVEXLQDLILAAVNEA
Template Known Secondary structure  TT


GGG

TT
Template Predicted Secondary structure 







Template SS confidence 







































   48.50.........60.........70.........80.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions