 |
Job Description | P36928 | Confidence | 91.27% | Date | Thu Jan 5 11:53:57 GMT 2012 |
Rank | 96 | Aligned Residues | 71 |
% Identity | 13% | Template | c3vgkB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:glucokinase; |
PDBTitle: crystal structure of a rok family glucokinase from streptomyces2 griseus
|
Resolution | 3.25 Å |
|
 |
  |   |
375 | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | |
. | . | . | . | . | . | . | . | 420 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 430 | . | . | |
. | . | . | . | . | . | . | 440 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |
|
|
| . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | A | L | S | Q | P | L | T | R | I | L | E | Q | V | Q | L | A | L | D | N | A | Q | E | K | P | D | V | I | Y | L | T | G | G | S | A | R | . |
S | P | L | I | K | K | A | L | A | E | Q | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | G | I | P | I | A | G | G | D | . |
D | F | G | S | V | T | A | G | L | A |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|   |
|
| . |   |
|   |
|   |   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
| . |   |   |   |
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   | . | . |
|   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
V | D | S | F | R | E | L | A | R | W | A | G | A | G | L | A | D | L | A | S | L | F | D | . |
. |
P | S | A | F | I | V | G | G | G | V | S | D | E | G | E | L | V | L | D | P | I | R | K | S | F | R | R | W | L | I | G | G | E | W | R | P | H | A | Q | V | L | A | A | Q | L | G | G | K | A | G | L | V | G | A | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
| S |  |  |  |  |  | S | T | T | G | G | G | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | T | T | T | S |
|
|
|  |  |  |  |
| S | S | G | G | G |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | |
|
. | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
  |
  |   |
443 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
R | W | A | E | V |
Query Conservation |   |
  |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
Template Sequence |   |
D | L | A | R | Q |
Template Known Secondary structure |   |
 |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
  |   |
308 | . | 310 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|