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Job DescriptionP36928
Confidence100.00%DateThu Jan 5 11:53:57 GMT 2012
Rank1Aligned Residues369
% Identity20%Templatec3d2fC_
PDB info PDB header:chaperoneChain: C: PDB Molecule:heat shock protein homolog sse1; PDBTitle: crystal structure of a complex of sse1p and hsp70
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADDDETQALLRRAIRYNREEDID
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Template Sequence  TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFE
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SSTT

TT

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SSSTTTT
GGG

TT
BTT
TT
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  VTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINF
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Template Sequence  QESKHFTS. . . . . . . . . . . . . KLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVP. . .
Template Known Secondary structure  TT

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TTSBTT
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   83......90 .........100.........110.........120.........130.........140......
 
   161........170.........180.........190.........200.. .......210.........220.........230...
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Query Sequence  QGLGGDEANTQAQGILERAAKRAGFRDVVFQYEPVAAGLDYE. . . . . . . ATLQEEKRVLVVDIGGGTTDCSLLLMGPQWR
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Template Sequence  . . . . . PWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQL
Template Known Secondary structure  .....TT

TT






SSS


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   147..150.........160.........170.........180.........190.........200.........210.........220.
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
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Query Sequence  SRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEKGIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLV
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Template Sequence  KVLGTACD. . . . . . KHFGGRDFDLAITEHFADEFKTKYKIDIR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ......TT
STS

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   222....... 230.........240.........250........
 
   314.....320.........330.........340.........350.........360. ........370.........380.........390.
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Query Sequence  RDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAETRASLPFI. . SNELATLISQRGLESALSQPLTRILEQVQL
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Template Sequence  . . . . . . . . . . . . . . . ENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTK
Template Known Secondary structure  ...............G

SSSSSSS

TTTTT
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   259260.........270.........280.........290.........300.........310.........320...
 
   392....... 400.........410.........420.........430.........440........
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Query Sequence  ALDNAQEK. . . PDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVV
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Template Sequence  ALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIH
Template Known Secondary structure  TT

GGG

SGGGGSTS


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TTTT
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   324.....330.........340.........350.........360.........370.........380...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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