Job Description P36928 Confidence 100.00% Date Thu Jan 5 11:53:57 GMT 2012 Rank 2 Aligned Residues 338 % Identity 26% Template c2v7yA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:chaperone protein dnak; PDBTitle: crystal structure of the molecular chaperone dnak from2 geobacillus kaustophilus hta426 in post-atp hydrolysis3 state Resolution 2.37 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		M	F	.	.	I	G	F	D	Y	G	T	A	N	C	S	V	A	V	M	R	D	G	K	P	H	L	L	K	M	E	N	D	S	T	L	L	P	S	M	L	C	A	P	T	R	E	A	V	S	E	W	L	Y	R	H	H	D	V	P	A	D	D	D	E	T	Q	A	L	L	R	R	A	I	R	Y	N	R	E	E	D
Query Conservation				.	.
Alig confidence				.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	S	K	I	I	G	I	D	L	G	T	T	N	S	C	V	A	V	L	E	G	G	E	V	K	V	I	P	N	P	E	G	N	R	T	T	P	S	V	V	A	F	K	N	G	E	R	L	V	G	E	V	A	K	R	Q	A	I	T	N	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S	S									T	T								T	T	S		S	S								S	S	S	S				S					T	T	T	T	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		I	D	V	T	A	K	S	V	Q	F	G	L	S	S	L	A	Q	Y	I	D	D	P	E	E	V	W	F	V	K	S	P	K	S	F	L	G	A	S	G	L	.	.	K	P	Q	Q	V	A	L	F	E	D	L	V	C	A	M	M	L	H	I	R	Q	Q	A	Q	A	Q	L	P	E	A	I	T	Q	A	V	I	G	R
Query Conservation																																										.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																																	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	I	S	I	K	R	H	M	G	T	D	Y	K	V	E	I	E	G	K	Q	Y	T	P	Q	E	I	S	A	I	I	L	Q	Y	L	K	S	Y	A	E	D	Y	L	G	E	P	V	T	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	T	T	T	S							T	T																									T	S				.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Template SS confidence
																												63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	N	F	Q	G	L	G	G	D	E	A	N	T	Q	A	Q	G	I	L	E	R	A	A	K	R	A	G	F	R	D	V	V	F	Q	Y	E	P	V	A	A	G	L	D	Y	E	A	T	L	Q	E	E	K	R	V	L	V	V	D	I	G	G	G	T	T	D	C	S	L	L	L	M	G	P	Q	W	R	S	R	L
Query Conservation
Alig confidence		.	.																																																																														.
Template Conservation		.	.																																																																														.
Template Sequence		.	.	R	A	V	I	T	V	P	A	Y	F	N	D	A	Q	R	Q	A	T	K	D	A	G	R	I	A	G	L	E	V	E	R	I	I	N	E	P	T	A	A	A	L	A	Y	G	L	D	K	E	E	D	Q	T	I	L	V	Y	D	L	G	G	G	T	F	D	V	S	I	L	E	L	G	D	G	V	F	E	V	.
Template Known Secondary structure		.	.								T	T																T	T																	T	T	G	G	G	S		S										S	S											T	T					.
Template Predicted Secondary structure		.	.																																																																														.
Template SS confidence
				111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	E	A	S	L	L	G	H	S	G	C	R	I	G	G	N	D	L	D	I	A	L	A	F	K	N	L	M	P	L	L	G	M	G	G	E	T	E	K	G	I	A	L	P	I	L	P	W	W	N	A	V	A	I	N	D	V	P	A	Q	S	D	F	Y	S	S	A	N	G	R	L	L	N	D	L	V	R	D	A
Query Conservation
Alig confidence		.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	K	A	T	A	G	D	N	H	L	G	G	D	D	F	D	Q	V	I	I	D	Y	L	V	N	Q	F	K	Q	E	H	G	I	D	L	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.							T	T		S																					S			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.							.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																																															.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.
Query Sequence		R	E	P	E	K	V	A	L	L	Q	K	V	W	R	Q	R	L	S	Y	R	L	V	R	S	A	E	E	C	K	I	A	L	S	S	V	A	E	T	R	A	S	L	P	F	I	.	.	.	.	.	.	S	N	E	L	A	T	L	I	S	Q	R	G	L	E	S	A	L	S	Q	P	L	T	R	I	L	E	Q	V	Q
Query Conservation																																															.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	M	A	L	Q	R	L	K	D	A	A	E	K	A	K	K	E	L	S	G	V	T	Q	T	Q	I	S	L	P	F	I	S	A	N	E	N	G	P	L	H	L	E	M	T	L	T	R	A	K	F	E	E	L	S	A	H	L	V	E	R	T	M	G	P	V	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T	T		S													T	T																		T						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		391	.	.	.	.	.	.	.	.				400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		L	A	L	D	N	A	Q	E	K	.	.	.	P	D	V	I	Y	L	T	G	G	S	A	R	S	P	L	I	K	K	A	L	A	E	Q	L	P	G	I	P	I	A	G	G	D	D	F	G	S	V	T	A	G	L	A	R	W	A	E	V	V
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		Q	A	L	Q	D	A	G	L	T	P	A	D	I	D	K	V	I	L	V	G	G	S	T	R	I	P	A	V	Q	E	A	I	K	R	E	L	G	K	E	P	H	K	G	V	N	P	D	E	V	V	A	I	G	A	A	I	Q	G	G	V	I
Template Known Secondary structure								T			G	G	G		S						S	G	G	G	G													S	S			B			S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.