 |
Job Description | P36928 | Confidence | 81.08% | Date | Thu Jan 5 11:53:57 GMT 2012 |
Rank | 117 | Aligned Residues | 69 |
% Identity | 14% | Template | c2hoeA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:n-acetylglucosamine kinase; |
PDBTitle: crystal structure of n-acetylglucosamine kinase (tm1224) from2 thermotoga maritima at 2.46 a resolution
|
Resolution | 2.46 Å |
|
 |
  |   |
371 | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | |
. | . | . | . | . | . | . | . | 420 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | R | G | L | E | S | A | L | S | Q | P | L | T | R | I | L | E | Q | V | Q | L | A | L | D | N | A | Q | E | K | P | D | V | I | Y | L | T | G | G | S | A | R | . |
S | P | L | I | K | K | A | L | A | E | Q | L | . |
. |
. |
. |
. |
. |
. |
. |
P | G | I | P | I | A | G | G | D | D | F | G | S | V | T | A | G | L |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|   |
|
| . |   |
|   |
|   |   |   |
|   |   |   |
| . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
| . | . | . | . | . | . |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
K | E | Y | F | D | D | I | A | R | Y | F | S | I | G | L | L | N | L | I | H | L | F | . |
. |
. |
. |
. |
. |
G | I | S | K | I | V | I | G | G | F | F | K | E | L | G | E | N | F | L | K | K | I | K | I | E | V | E | T | H | L | L | Y | K | H | S | V | D | X | S | F | S | K | V | Q | E | P | V | I | A | F | G | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  | G | G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|
|
|  |  |  |  |
|
|
|
| S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . |
  |
  |   |
442 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
A | R | W | A |
Query Conservation |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|   |   |   |
Template Sequence |   |
A | V | H | A |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
354 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|