Job Description P36928 Confidence 94.93% Date Thu Jan 5 11:53:57 GMT 2012 Rank 79 Aligned Residues 73 % Identity 11% Template c1z05A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, rok family; PDBTitle: crystal structure of the rok family transcriptional regulator, homolog2 of e.coli mlc protein. Resolution 2.00 Å

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		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.										.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																																											.													.	.	.	.	.	.	.	.	.										.
Query SS confidence																																											.													.	.	.	.	.	.	.	.	.										.
Query Sequence		Q	R	G	L	E	S	A	L	S	Q	P	L	T	R	I	L	E	Q	V	Q	L	A	L	D	N	A	Q	E	K	P	D	V	I	Y	L	T	G	G	S	A	R	.	S	P	L	I	K	K	A	L	A	E	Q	L	.	.	.	.	.	.	.	.	.	P	G	I	P	I	A	G	G	D	.	D	F	G	S	V	T	A
Query Conservation																																											.													.	.	.	.	.	.	.	.	.										.
Alig confidence																								.	.	.	.	.	.														.													.	.	.	.	.	.	.	.	.										.
Template Conservation																								.	.	.	.	.	.
Template Sequence		V	D	V	I	Q	Q	L	G	R	Y	L	G	A	A	I	A	I	V	I	N	L	F	.	.	.	.	.	.	N	P	E	K	I	L	I	G	G	V	I	N	Q	A	K	S	I	L	Y	P	S	I	E	Q	C	I	R	E	Q	S	L	P	V	Y	H	Q	D	L	K	L	V	E	S	R	F	Y	K	Q	A	T	M	P
Template Known Secondary structure																								.	.	.	.	.	.			S						S	G	G	G	G	G																S						T	T							S		S	S		T	T
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.							.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	R	W	A	E	V	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	A	L	I	K	Q	A	L	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions