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Job DescriptionP36928
Confidence53.72%DateThu Jan 5 11:53:57 GMT 2012
Rank148Aligned Residues334
% Identity17%Templatec1qhaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein (hexokinase); PDBTitle: human hexokinase type i complexed with atp analogue amp-pnp
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10........ .20.........30.........40.........50.........60.........70.........
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Query Sequence  FIGFDYGTANCSVAVMR. . DGKPHLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADDDETQALLRRAIRYNREEDI
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Template Sequence  FLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SSS

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   528.530.........540.........550.........560...
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  DVTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPIN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IEIMQGTGEELFDHIVSCISDFLDYMGIKG. . . . . PRMPLG
Template Known Secondary structure  .......................................TSBSTT

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   564.....570.........580.........590... ......
 
   160..... ....170.........180.... .....190.........200.........210.....
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Query Sequence  FQGLGG. . . . . . . . . . . . . . . . . . . . . DEANTQAQGILERAAKRAG. . . FRDVVFQYEPVAAGLDYEATLQEEKRVLVVD
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Template Sequence  FTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYE. . EPTCEVGLI
Template Known Secondary structure 
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   600.........610.........620.........630.........640.........650.........660........ .670.......
 
   216...220.........230.........240.........250... ...... 260.........270.........
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Query Sequence  IGGGTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGN. . . . . . . . DLDIAL. . . . . . . . AFKNLMPLLGMGGETEKGIA
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Template Sequence  VGTGSNACYMEEMKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVNEYSLNAGKQRYEKMISGMYLGEIVRNI
Template Known Secondary structure  SSSGGG
TTSS

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GGGTTSSSTTTTT

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   678.680.........690.........700.........710.........720.........730.........740.........750.......
 
   280.........290.........300.........310.........320.........330.........340.........350.........
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Query Sequence  LPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAETRASLP
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Template Sequence  LIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNSTCDDSILVK. . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTSSGGG


TTTTSTT
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   758.760.........770.........780.........790.........800.........810.........820
 
   360.........370.........380.........390.........400.........410 .........420.........430..
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Query Sequence  FISNELATLISQRGLESALSQPLTRILEQVQLALDNAQEKPDVIYLTGGSA. . . . . . . RSPLIKKALAEQLPGIPIAGGD
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Template Sequence  . . . . . . . . TVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLL
Template Known Secondary structure  ........TT
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   821........830.........840.........850.........860.........870.........880.........890..
 
   433......440.........450
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Query Sequence  DFGSVTAGLARWAEVVFR
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Template Sequence  SEDGSGKGAALITAVGVR
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   893......900.........910
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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