Job Description P50466 Confidence 98.69% Date Thu Jan 5 12:04:47 GMT 2012 Rank 62 Aligned Residues 105 % Identity 10% Template c3cloC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution Resolution 2.04 Å

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		19	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.											.	.	.	.	.	.
Predicted Secondary structure										.																											.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																											.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	M	S	T	T	D	L	.	Q	S	Y	I	T	H	A	N	D	T	F	V	Q	V	S	G	Y	T	L	Q	E	L	Q	G	Q	P	.	.	.	.	.	.	.	.	H	N	M	V	R	H	P	D	M	P	K	A	A	F	A	D	M	W	F	T	L	.	.	.	.	.	.	.	.	.	.	K	K	G	E	P	W
Query Conservation										.																											.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Alig confidence										.																											.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	C	A	V	I	S	D	L	S	N	R	K	S	Y	V	T	V	H	P	W	A	N	F	L	G	L	T	P	E	E	A	A	L	S	V	I	D	S	X	D	E	D	C	I	Y	R	R	I	H	P	E	D	L	V	E	K	R	L	X	E	Y	K	F	F	Q	K	T	F	S	X	S	P	G	E	R	L	K	Y	R	G
Template Known Secondary structure									T	T	T	T								T	T		G	G	G												T	T				T					T	T	B																					T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																										.		.
Query SS confidence																										.		.
Query Sequence		S	G	I	V	K	N	R	R	K	N	G	D	H	Y	W	V	R	A	N	A	V	P	M	V	.	R	.	E	G	K	I	S	G	Y	M	S	I	R	T	R	A	T	D	E	E	I
Query Conservation																										.		.
Alig confidence																										.		.
Template Conservation
Template Sequence		R	C	R	L	R	X	X	N	E	K	G	V	Y	Q	Y	I	D	N	L	V	Q	I	X	Q	N	T	P	A	G	N	V	W	L	I	F	C	L	Y	S	L	S	A	D	Q	R	P
Template Known Secondary structure										T	T	S																T	T	S													S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions