Return to main results Retrieve Phyre Job Id

Job DescriptionP50466
Confidence98.91%DateThu Jan 5 12:04:47 GMT 2012
Rank59Aligned Residues101
% Identity19%Templatec2w0nA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sensor protein dcus; PDBTitle: plasticity of pas domain and potential role for signal2 transduction in the histidine-kinase dcus
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  NTPLADDTTLMSTTDLQSYITHANDTFVQVSGYTLQELQGQPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNG
Query Conservation            
  

  
 
   
 
     


 




     
  
             
  
     
     


Alig confidence 



















































....





















..
Template Conservation    

      
   
  
 
   
  
    
                    ....                      ..
Template Sequence  QAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQV. . . . VDVSEVLRDGTPRRDEEITIKD. .
Template Known Secondary structure 





BTTTB


B

S
TTTTTSS


TT


S
T....TT






SSS..
Template Predicted Secondary structure 



















....













..
Template SS confidence 















































































   18.20.........30.........40.........50.........60......... 70.........80.........90.
 
   91........100.........110.........
Predicted Secondary structure 







Query SS confidence 




























Query Sequence  DHYWVRANAVPMVREGKISGYMSIRTRAT
Query Conservation      
     

   
          


Alig confidence  ..


























Template Conservation  ..        

   
   
 
    


Template Sequence  . . RLLLINTVPVRSNGVIIGAISTFRDKT
Template Known Secondary structure  ..







SS









Template Predicted Secondary structure  ..




Template SS confidence 




























   92.......100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions