Job Description P50466 Confidence 25.50% Date Thu Jan 5 12:04:47 GMT 2012 Rank 102 Aligned Residues 102 % Identity 8% Template c2d3eD_ PDB info PDB header:contractile protein Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin Resolution 2.60 Å

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		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	D	I	R	K	L	I	D	A	S	A	D	K	V	Q	S	G	S	Q	Q	V	H	A	A	G	R	T	M	E	D	I	V	A	Q	V	K	N	V	T	Q	L	I	A	Q	I	S	H	S	T	L	E	Q	A	D	G	L	S	S	L	T	R	A	V	D	E	L	N	L	I	T	Q	K	N	A	E	L	V	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	E	L	L	S	K	N	Y	H	L	E	N	E	V	A	R	L	K	K	L	L	E	R	A	E	E	R	A	E	L	S	E	G	K	C	A	E	L	E	E	E	L	K	T	V	T	N	N	L	K	S	L	E	A	Q	A	E	K	Y	S	Q	K	E	D	K	Y	E	E	E	I	K	V	L	S	D	K	L	K	E
Template Known Secondary structure																																	T	T	S													T	T	T	T						T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	Q	V	S	A	M	V	K	H	R	A	S	R	L	E	D	A	V	T	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	T	R	A	E	F	A	E	R	S	V	T	K	L	E	K	S	I	D	D	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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