Job Description P50466 Confidence 29.99% Date Thu Jan 5 12:04:47 GMT 2012 Rank 100 Aligned Residues 82 % Identity 6% Template c1s94A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:s-syntaxin; PDBTitle: crystal structure of the habc domain of neuronal syntaxin from the2 squid loligo pealei Resolution 3.34 Å

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		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.													.	.	490	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	A	A	G	R	T	M	E	D	I	V	A	Q	V	K	N	V	T	Q	L	I	A	Q	I	S	H	S	T	L	E	Q	A	D	G	L	S	S	L	T	R	A	V	D	E	L	N	L	I	T	Q	K	N	A	E	L	V	E	E	S	A	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	S	A	M	V	K
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	E	E	F	F	E	Q	V	E	E	I	R	A	M	I	D	K	I	S	D	N	V	D	A	V	K	K	K	H	S	D	I	L	S	M	K	E	E	L	E	E	L	M	T	D	I	K	R	T	A	N	K	V	R	G	K	L	K	T	I	E	L	N	I	E	Q	E	E	S	A	D	L	R	I	R	K	T	Q	Y	S
Template Known Secondary structure																																																																				T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		493	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	A	S	R	L	E	D	A	V	T	V	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	S	R	K	F	V	E	V	M	S	D	Y	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions