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Job DescriptionP32169
Confidence100.00%DateThu Jan 5 11:49:47 GMT 2012
Rank7Aligned Residues202
% Identity16%Templated1k0wa_
SCOP infoAraD/HMP-PK domain-like AraD/HMP-PK domain-like AraD-like aldolase/epimerase
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  QGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANL
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Template Sequence  RQVLEANLALPKHNLVTLTWGNVSAVDRERGV. . . . . . . . . . . . . . . . . . . . . . . . . . . FVIKPSGVDYSIMTAD. . . . .
Template Known Secondary structure  TT


TT

TTTT...........................
BSS

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GG.....
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   7..10.........20.........30........ .40.........50....
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  GIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGST
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Template Sequence  DMVVVSIETGEV. . . . . VEGAKKPSSDTPTHRLLYQAF. . . . . PSIGGIVHTHSRHATIWAQAGQS. . . . . . . . IPATGT
Template Known Secondary structure  G
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TT
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   55....60...... ...70.........80....... ..90.........100.........110 ......
 
   171........180......... 190.........200. ........210.........220.........230.......
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Query Sequence  ECLVVFPDGVGILPWMVPG. . . . . . TDEIGQATAQEM. . . . . . . QKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQV
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Template Sequence  THANYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYM
Template Known Secondary structure  TT
SS
B
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SSTT

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   117..120.........130.........140.........150.........160.........170.........180.........190......
 
   238.240.........250.........260..
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Query Sequence  LVKVYSMGGMKQTISREELIALGKR
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Template Sequence  GIFCRQLAPQLPDMQQTLLNKHYLR
Template Known Secondary structure 
TT




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   197..200.........210.........220.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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