|   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | M | I | K | A | T | T | D | A | W | L | K | G | W | D | E | R | N | G | G | N | L | T | L | R | L | D | D | A | D | I | A | P | Y | H | D | N | F | H | Q | Q | P | R | Y | I | P | L | S | Q | P | M | P | L | L | A | N | T | P | F | I | V | T | G | S | G | K | F | F | R | N | V | Q | L | D | P | A | A | N | L |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|
|
|   |   |   |   |   |
|   |   |   | . | . | . | . | . |
Template Sequence |   |
R | Q | V | L | E | A | N | L | A | L | P | K | H | N | L | V | T | L | T | W | G | N | V | S | A | V | D | R | E | R | G | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | V | I | K | P | S | G | V | D | Y | S | I | M | T | A | D | . |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T |
|
|  |  |  |  |  |  | T | T | T | T |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
| B | S | S |
|
| T | T | T |
|
| G | G | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
|
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | V | K | V | D | S | D | G | A | G | Y | H | I | L | W | G | L | T | N | E | A | V | P | T | S | E | L | P | A | H | F | L | S | H | C | E | R | I | K | A | T | N | G | K | D | R | V | I | M | H | C | H | A | T | N | L | I | A | L | T | Y | V | L | E | N | D | T | A | V | F | T | R | Q | L | W | E | G | S | T |
Query Conservation |   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . |   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |   | . | . | . | . | . |
|
|
|   |
|
|
|
|
|
|   |   |   |   |   |
|   |
|   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
Template Sequence |   |
D | M | V | V | V | S | I | E | T | G | E | V | . |
. |
. |
. |
. |
V | E | G | A | K | K | P | S | S | D | T | P | T | H | R | L | L | Y | Q | A | F | . |
. |
. |
. |
. |
P | S | I | G | G | I | V | H | T | H | S | R | H | A | T | I | W | A | Q | A | G | Q | S | . |
. |
. |
. |
. |
. |
. |
. |
I | P | A | T | G | T |
Template Known Secondary structure |   |
G |
|  |  |  |  | T | T | T |
|
|  | . | . | . | . | . |  |  |
| S | S |
| B |
| T | T |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | T | T |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | T |
|
| . | . | . | . | . | . | . | . | B |
|
|
| S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
|
|
|
|
|
. | . | . | . | . | . |
  |
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | C | L | V | V | F | P | D | G | V | G | I | L | P | W | M | V | P | G | . |
. |
. |
. |
. |
. |
T | D | E | I | G | Q | A | T | A | Q | E | M | . |
. |
. |
. |
. |
. |
. |
Q | K | H | S | L | V | L | W | P | F | H | G | V | F | G | S | G | P | T | L | D | E | T | F | G | L | I | D | T | A | E | K | S | A | Q | V |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
| . | . | . | . | . | . |
|   |
|
|
|   |   |
|   |   |   |
| . | . | . | . | . | . | . |   |   |   |   |
|
|
|
|   |
|
|
|
|
|   |   |
|   |
|
|   |
|
|   |   |   |   |
|   |
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
Template Sequence |   |
T | H | A | N | Y | F | Y | G | T | I | P | C | T | R | K | M | T | D | A | E | I | N | G | E | Y | E | W | E | T | G | N | V | I | V | E | T | F | E | K | Q | G | I | D | A | A | Q | M | P | G | V | L | V | H | S | H | G | P | F | A | W | G | K | N | A | E | D | A | V | H | N | A | I | V | L | E | E | V | A | Y | M |
Template Known Secondary structure |   |
 |  |  | T | T |
| S | S |
| B |
| B |
|
|
|
|
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | T |
|
|  |  |  |  | T | T | T |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
  |
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | K | V | Y | S | M | G | G | M | K | Q | T | I | S | R | E | E | L | I | A | L | G | K | R |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | I | F | C | R | Q | L | A | P | Q | L | P | D | M | Q | Q | T | L | L | N | K | H | Y | L | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |
  |