 |
Job Description | P32169 | Confidence | 10.17% | Date | Thu Jan 5 11:49:47 GMT 2012 |
Rank | 58 | Aligned Residues | 33 |
% Identity | 9% | Template | d1ig4a_ |
SCOP info | DNA-binding domain
| DNA-binding domain
| Methyl-CpG-binding domain, MBD
|
Resolution | UNK |
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | R | Y | I | P | L | S | Q | P | M | P | L | L | A | N | T | P | F | I | V | T | G | S | G | K | F | F | R | N | V | Q | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|
|
|   |
|
|   |
|
|
|   |
|
|   |   |
|
Template Sequence |   |
K | R | R | E | V | F | R | K | S | G | A | T | C | G | R | S | D | T | Y | Y | Q | S | P | T | G | D | R | I | R | S | K | V | E |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
| S | S | S | S | T | T |
|
|  |  |  |  |  |
| S | S | S |
|  |  |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|