Job Description P32169 Confidence 100.00% Date Thu Jan 5 11:49:47 GMT 2012 Rank 10 Aligned Residues 183 % Identity 17% Template c3m4rA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: structure of the n-terminal class ii aldolase domain of a conserved2 protein from thermoplasma acidophilum Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	G	M	I	K	A	T	T	D	A	W	L	K	G	W	D	E	R	N	G	G	N	L	T	L	R	L	D	D	A	D	I	A	P	Y	H	D	N	F	H	Q	Q	P	R	Y	I	P	L	S	Q	P	M	P	L	L	A	N	T	P	F	I	V	T	G	S	G	K	F	F	R	N	V	Q	L	D	P	A	A	N
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		I	D	E	V	V	Y	G	S	R	L	I	G	S	D	P	D	L	V	L	G	G	G	N	T	S	V	K	T	T	E	R	D	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	I	I	S	V	L	R	V	K	N	S	G	S	N	L	G	T	I	D	S	R	.	.	.	.
Template Known Secondary structure														T		T	T	T																T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										B	T	T	S		G	G	G			G	G	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.																	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	I	V	K	V	D	S	D	G	A	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	L	W	G	L	T	N	E	A	V	P	T	S	E	L	P	A	H	F	L	S	H	C	E	R	I	K	A	T	N	G	K	D	R	V	I	M	H	C	H	A	T	N	L	I	A	L	T	Y	V
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		.	G	F	T	G	I	R	X	D	D	A	L	A	A	A	K	I	D	K	X	T	D	E	A	X	V	D	Y	L	K	K	S	X	V	N	P	S	E	P	S	P	S	V	E	T	F	L	H	A	F	L	.	.	.	.	.	.	.	.	.	.	P	Y	K	F	V	X	H	S	H	A	D	A	I	L	S	I	T	N	T
Template Known Secondary structure		.	G												G	G	G		S														T	B	S	S	T	T	S			B		T	T						T	S	.	.	.	.	.	.	.	.	.	.		S	S															T	S
Template Predicted Secondary structure		.																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
			71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	N	D	T	A	V	F	T	R	Q	L	W	E	G	S	T	E	C	L	V	V	F	P	D	G	V	G	I	L	P	W	M	V	P	G	T	D	E	I	G	Q	A	T	A	Q	E	M	Q	K	H	S	L	V	L	W	P	F	H	G	V	F	G	S	G	P	T	L	D	E	T	F	G	L	I	D	T	A	E	K
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	Q	I	A	K	I	L	G	N	V	V	V	L	P	Y	I	P	P	G	F	T	L	A	K	E	V	X	N	C	F	K	K	G	I	D	G	I	V	L	R	K	H	G	L	L	T	F	G	D	T	G	K	E	A	Y	D	R	H	I	N	I	V	S
Template Known Secondary structure		S			.	.	.	.	.	.	.	.	.	.	.	.	.										S									S	S													T	T		S					T	T	T							S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.														.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		234	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	Q	V	L	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	E	N	F	I	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions