Job Description P77564 Confidence 2.35% Date Thu Jan 5 12:30:37 GMT 2012 Rank 73 Aligned Residues 190 % Identity 8% Template c3eiwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:htsa protein; PDBTitle: crystal structure of staphylococcus aureus lipoprotein, htsa Resolution 1.60 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	V	D	E	A	K	R	Q	W	L	Q	G	M	R	H	P	V	D	T	V	T	E	P	E	P	A	E	I	L	A	E	F	I	R	Q	H	S	A	A	G	Q	L	V	A	R	A	V	F	L	S	P	P	Y	L	V	A	E	E	E	L	S	V	L	L	E	S	I	K	Q	N	G	D	Y	A	D	I	A	C	L
Query Conservation
Alig confidence																																								.	.	.
Template Conservation																																								.	.	.
Template Sequence		S	S	R	H	K	G	I	N	K	E	L	N	K	I	A	P	T	L	S	L	K	S	F	D	G	D	Y	K	Q	N	I	N	S	F	K	T	I	A	.	.	.	K	A	L	N	K	E	K	E	G	E	K	R	L	A	E	H	D	K	L	I	N	K	Y	K	D	E	I	K	F	D	R	N	Q	K	V	L	P	A	V
Template Known Secondary structure		T	T	T	T	T	T	T								S							S	T	T															.	.	.			T	T																									S		T	T	S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		T	G	S	K	D	D	Y	Y	Y	S	T	Q	A	M	S	E	N	Y	A	A	M	S	L	Q	V	V	E	Q	D	I	C	R	A	I	A	H	A	V	R	F	E	C	Q	T	Y	P	R	P	Y	K	V	A	M	L	M	Q	A	P	Y	Y	F	.	.	.	.	.	Q	E	A	Q	I	E	A	A	I	A	A	M	D	V
Query Conservation																																																															.	.	.	.	.
Alig confidence																																.																															.	.	.	.	.
Template Conservation																																.
Template Sequence		V	A	K	A	G	L	L	A	H	P	N	Y	S	Y	V	G	Q	F	L	N	E	L	G	F	K	N	A	L	S	D	.	D	V	T	K	G	L	S	K	Y	L	K	G	P	Y	L	Q	L	D	T	E	H	L	A	D	L	N	P	E	R	M	I	I	M	T	D	H	A	K	K	D	S	A	E	F	K	K	L	Q	E
Template Known Secondary structure				T	T							T	T	S									T	T			B	S	S			.					T	T	G	G	G			T	T															S							G	G	G
Template Predicted Secondary structure																																.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.
Query Sequence		A	P	E	Y	A	D	I	R	Q	V	E	S	S	T	A	V	L	Y	L	F	S	E	R	F	M	T	Y	G	K	.	.	.	.	.	.	.	.	A	Y	G	L	C	E	W	F	E	V	E	Q
Query Conservation																															.	.	.	.	.	.	.	.
Alig confidence													.	.																	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		D	A	T	W	K	K	L	N	A	V	K	.	.	N	N	R	V	D	I	V	D	R	D	V	W	A	R	S	R	G	L	I	S	S	E	E	M	A	K	E	L	V	E	L	S	K	K	E	Q
Template Known Secondary structure							T						.	.	T	T											T	T	T		S																	S
Template Predicted Secondary structure													.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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