Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFN2
Confidence51.79%DateThu Jan 5 11:26:50 GMT 2012
Rank1Aligned Residues69
% Identity13%Templated1f6ga_
SCOP infoVoltage-gated potassium channels Voltage-gated potassium channels Voltage-gated potassium channels
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80 .........90.........100...
Predicted Secondary structure 















......
Query SS confidence 













































. . . . . .






















Query Sequence  KLVRILVVLSIFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSS. . . . . . SELLDEVDRELAASETRLREMER
Query Conservation    


  
           
  

  
   
  
            ......      
   
   
 

  

 
Alig confidence 













































......






















Template Conservation     
         
       
  
                                 
     

   
    
Template Sequence  LWGRCVAVVVMVAGITSFGLVTAALATWFVGREQERRGHFVRHSEKAAEEAYTRTTRALHERFDRLERMLDDNRR
Template Known Secondary structure  TTS
S

SSTTS
S
STT

Template Predicted Secondary structure 


Template SS confidence 










































































   86...90.........100.........110.........120.........130.........140.........150.........160
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions