Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFN2
Confidence3.40%DateThu Jan 5 11:26:50 GMT 2012
Rank55Aligned Residues16
% Identity44%Templatec1kdlA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:yopd protein; PDBTitle: solution structure of the amphipathic domain of yopd from2 yersinia
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........
Predicted Secondary structure 




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Query Sequence  SETRLREMERYVTSDT
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Template Sequence  MKDVLRLIEQYVSSHT
Template Known Secondary structure  TTTT
Template Predicted Secondary structure 
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   281........290......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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