Job Description P0AFN2 Confidence 6.54% Date Thu Jan 5 11:26:50 GMT 2012 Rank 28 Aligned Residues 28 % Identity 14% Template c1envA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:hiv-1 envelope protein chimera consisting of a fragment of PDBTitle: atomic structure of the ectodomain from hiv-1 gp41 Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	A	S	E	T	R	L	R	E	M	E	R	Y	V	T	S	D	T	F	T	L	R	S	R	F	R	Q	L
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		G	I	K	Q	L	Q	A	R	I	L	A	V	E	R	Y	L	K	.	.	W	M	E	W	D	R	E	I	N	N	Y
Template Known Secondary structure																			.	.
Template Predicted Secondary structure																			.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions