Job Description P0A6Z6 Confidence 100.00% Date Thu Jan 5 11:04:18 GMT 2012 Rank 1 Aligned Residues 133 % Identity 29% Template c2ca9B_ PDB info PDB header:transcriptional regulation Chain: B: PDB Molecule:putative nickel-responsive regulator; PDBTitle: apo-nikr from helicobacter pylori in closed trans-2 conformation Resolution 2.05 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		M	Q	R	V	T	I	T	L	D	D	D	L	L	E	T	L	D	S	L	S	Q	R	R	G	Y	N	N	R	S	E	A	I	R	D	I	L	R	S	A	L	A	Q	E	A	T	Q	Q	H	.	.	.	G	T	Q	G	F	A	V	L	S	Y	V	Y	E	H	E	K	R	D	L	A	S	R	I	V	S	T	Q	H	H
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.
Template Conservation
Template Sequence		I	I	R	F	S	V	S	L	Q	Q	N	L	L	D	E	L	D	N	R	I	I	K	N	G	Y	S	S	R	S	E	L	V	R	D	M	I	R	E	K	L	V	E	D	N	W	A	E	D	N	P	N	D	E	S	K	I	A	V	L	V	V	I	Y	D	H	H	Q	R	E	L	N	Q	R	M	I	D	I	Q	H	A
Template Known Secondary structure																			T	T	T	G	G	G	T		S	S																							T	T														T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	D	L	S	V	A	T	L	H	V	H	I	N	H	D	D	C	L	E	I	A	V	L	K	G	D	M	G	D	V	Q	H	F	A	D	D	V	I	A	Q	R	G	V	R	H	G	H	L	Q	C	L	P	K	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	T	H	V	L	C	T	T	H	I	H	M	D	E	H	N	C	L	E	T	I	I	L	Q	G	N	S	F	E	I	Q	R	L	Q	L	E	I	G	G	L	R	G	V	K	F	A	K	L	T	K	A	S	S	F	E
Template Known Secondary structure														S	S	S	S																								T	S	T	T											G	G	G
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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