Job Description P0A6Z6 Confidence 100.00% Date Thu Jan 5 11:04:18 GMT 2012 Rank 3 Aligned Residues 116 % Identity 103% Template c1q5vB_ PDB info PDB header:transcription Chain: B: PDB Molecule:nickel responsive regulator; PDBTitle: apo-nikr Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	R	V	T	I	T	L	D	D	D	L	L	E	T	L	D	S	L	S	Q	R	R	G	Y	N	N	R	S	E	A	I	R	D	I	L	R	S	A	L	A	Q	E	A	T	Q	Q	H	G	T	Q	G	F	A	V	L	S	Y	V	Y	E	H	E	K	R	D	L	A	S	R	I	V	S	T	Q	H	H	H	H	D
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	Q	R	V	T	I	T	L	D	D	D	L	L	E	T	L	D	S	L	S	Q	R	R	G	Y	N	N	R	S	E	A	I	R	D	I	L	R	S	A	L	A	Q	E	A	T	Q	Q	H	G	T	Q	G	F	A	V	L	S	Y	V	Y	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Template Known Secondary structure																									T			S														T	T						T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																		.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	A	T	L	H	V	H	I	N	H	D	D	C	L	E	I	A	V	L	K	G	D	M	G	D	V	Q	H	F	A	D	D	V	I	A	Q	R	G	V	R	H	G	H	L	Q	C	L	P	K	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	V	A	T	L	H	V	H	I	N	H	D	D	C	L	E	I	A	V	L	K	G	D	M	G	D	V	Q	H	F	A	D	D	V	I	A	Q	R	G	V	R	H	G	H	L	Q	C	L	P	K	E	D
Template Known Secondary structure											S	S	S	S																									S	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions