Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	N	M	K	T	I	E	D	V	F	I	H	L	L	S	D	T	Y	S	A	E	K	Q	L	T	R	A	L	A	K	L	A	R	A	T	S	N	E	K	L	S	Q	A	F	H	A	H	L	E	E	T	H	G	Q	I	E	R	I	D	Q
Secondary structure
SS confidence
Disorder		?	?	?	?	?																														?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		V	V	E	S	E	S	N	L	K	I	K	R	M	K	C	V	A	M	E	G	L	I	E	E	A	N	E	V	I	E	S	T	E	K	N	E	V	R	D	A	A	L	I	A	A	A	Q	K	V	E	H	Y	E	I	A	S	Y	G	T	L
Secondary structure
SS confidence
Disorder								?	?	?	?	?	?	?	?	?															?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Sequence		A	T	L	A	E	Q	L	G	Y	R	K	A	A	K	L	L	K	E	T	L	E	E	E	K	A	T	D	I	K	L	T	D	L	A	I	N	N	V	N	K	K	A	E	N	K	A
Secondary structure
SS confidence
Disorder																																				?	?	?	?	?				?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2gs4 chain A domain 1 Region: 3 - 161 Aligned: 159 Modelled: 158 Confidence: 100.0% Identity: 98% Fold: Ferritin-like Superfamily: Ferritin-like Family: YciF-like Phyre2 PDB 2gyq chain A domain 1 Region: 1 - 154 Aligned: 153 Modelled: 154 Confidence: 100.0% Identity: 46% Fold: Ferritin-like Superfamily: Ferritin-like Family: YciF-like Phyre2 PDB 3hiu chain B Region: 4 - 153 Aligned: 131 Modelled: 130 Confidence: 100.0% Identity: 23% PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of protein (xcc3681) from xanthomonas2 campestris pv. campestris str. atcc 33913 Phyre2 PDB 3ogh chain B Region: 2 - 160 Aligned: 143 Modelled: 142 Confidence: 99.9% Identity: 22% PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ycie; PDBTitle: crystal structure of ycie protein from e. coli cft073, a member of2 ferritine-like superfamily of diiron-containing four-helix-bundle3 proteins Phyre2 PDB 3r2r chain A Region: 1 - 153 Aligned: 133 Modelled: 138 Confidence: 98.7% Identity: 18% PDB header:metal binding protein Chain: A: PDB Molecule:bacterioferritin; PDBTitle: 1.65a resolution structure of iron soaked ftna from pseudomonas2 aeruginosa (ph 6.0) Phyre2 PDB 2qqy chain A Region: 7 - 153 Aligned: 130 Modelled: 132 Confidence: 98.6% Identity: 16% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma b operon; PDBTitle: crystal structure of ferritin like, diiron-carboxylate proteins from2 bacillus anthracis str. ames Phyre2 PDB 2htn chain A domain 1 Region: 1 - 153 Aligned: 134 Modelled: 140 Confidence: 98.6% Identity: 13% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 3bkn chain B Region: 1 - 153 Aligned: 134 Modelled: 138 Confidence: 98.6% Identity: 15% PDB header:metal binding protein Chain: B: PDB Molecule:bacterioferritin; PDBTitle: the structure of mycobacterial bacterioferritin Phyre2 PDB 2vzb chain A Region: 7 - 153 Aligned: 139 Modelled: 147 Confidence: 98.6% Identity: 17% PDB header:metal transport Chain: A: PDB Molecule:putative bacterioferritin-related protein; PDBTitle: a dodecameric thioferritin in the bacterial domain, characterization2 of the bacterioferritin-related protein from bacteroides fragilis Phyre2 PDB 3gvy chain C Region: 10 - 153 Aligned: 127 Modelled: 129 Confidence: 98.5% Identity: 13% PDB header:metal binding protein Chain: C: PDB Molecule:bacterioferritin; PDBTitle: crystal structure of bacterioferritin from r.sphaeroides Phyre2 PDB 2fkz chain A domain 1 Region: 3 - 153 Aligned: 134 Modelled: 137 Confidence: 98.5% Identity: 16% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1nf4 chain A Region: 7 - 153 Aligned: 131 Modelled: 133 Confidence: 98.5% Identity: 13% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 3qhb chain A Region: 14 - 156 Aligned: 141 Modelled: 143 Confidence: 98.4% Identity: 16% PDB header:metal transport Chain: A: PDB Molecule:symerythrin; PDBTitle: crystal structure of oxidized symerythrin from cyanophora paradoxa Phyre2 PDB 3fvb chain B Region: 2 - 153 Aligned: 134 Modelled: 137 Confidence: 98.4% Identity: 16% PDB header:metal binding protein Chain: B: PDB Molecule:bacterioferritin; PDBTitle: crystal structure of ferritin (bacterioferritin) from2 brucella melitensis Phyre2 PDB 1yv1 chain A domain 1 Region: 11 - 153 Aligned: 126 Modelled: 128 Confidence: 98.3% Identity: 16% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1lko chain A domain 1 Region: 10 - 156 Aligned: 130 Modelled: 130 Confidence: 98.2% Identity: 15% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 2clb chain P Region: 8 - 159 Aligned: 145 Modelled: 152 Confidence: 98.2% Identity: 12% PDB header:metal binding protein Chain: P: PDB Molecule:dps-like protein; PDBTitle: the structure of the dps-like protein from sulfolobus2 solfataricus reveals a bacterioferritin-like di-metal3 binding site within a dps-like dodecameric assembly Phyre2 PDB 1jgc chain A Region: 1 - 153 Aligned: 133 Modelled: 138 Confidence: 98.2% Identity: 14% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 1j30 chain A Region: 10 - 153 Aligned: 124 Modelled: 124 Confidence: 98.2% Identity: 15% Fold: Ferritin-like Superfamily: Ferritin-like Family: Ferritin Phyre2 PDB 2oh3 chain A domain 1 Region: 10 - 153 Aligned: 134 Modelled: 133 Confidence: 97.9% Identity: 13% Fold: Ferritin-like Superfamily: Ferritin-like Family: AMB4284-like Phyre2 1 d2gs4a1 2 d2gyqa1 3 c3hiuB_ 4 c3oghB_ 5 c3r2rA_ 6 c2qqyA_ 7 d2htna1 8 c3bknB_ 9 c2vzbA_ 10 c3gvyC_ 11 d2fkza1 12 d1nf4a_ 13 c3qhbA_ 14 c3fvbB_ 15 d1yv1a1 16 d1lkoa1 17 c2clbP_ 18 d1jgca_ 19 d1j30a_ 20 d2oh3a1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2gs4a1 100.0 98 Fold:Ferritin-like Superfamily:Ferritin-like Family:YciF-like 2 d2gyqa1 100.0 46 Fold:Ferritin-like Superfamily:Ferritin-like Family:YciF-like 3 c3hiuB_ 100.0 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of protein (xcc3681) from xanthomonas2 campestris pv. campestris str. atcc 33913 4 c3oghB_ 99.9 22 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ycie; PDBTitle: crystal structure of ycie protein from e. coli cft073, a member of2 ferritine-like superfamily of diiron-containing four-helix-bundle3 proteins 5 c3r2rA_ 98.7 18 PDB header:metal binding protein Chain: A: PDB Molecule:bacterioferritin; PDBTitle: 1.65a resolution structure of iron soaked ftna from pseudomonas2 aeruginosa (ph 6.0) 6 c2qqyA_ 98.6 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma b operon; PDBTitle: crystal structure of ferritin like, diiron-carboxylate proteins from2 bacillus anthracis str. ames 7 d2htna1 98.6 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 8 c3bknB_ 98.6 15 PDB header:metal binding protein Chain: B: PDB Molecule:bacterioferritin; PDBTitle: the structure of mycobacterial bacterioferritin 9 c2vzbA_ 98.6 17 PDB header:metal transport Chain: A: PDB Molecule:putative bacterioferritin-related protein; PDBTitle: a dodecameric thioferritin in the bacterial domain, characterization2 of the bacterioferritin-related protein from bacteroides fragilis 10 c3gvyC_ 98.5 13 PDB header:metal binding protein Chain: C: PDB Molecule:bacterioferritin; PDBTitle: crystal structure of bacterioferritin from r.sphaeroides 11 d2fkza1 98.5 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 12 d1nf4a_ 98.5 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 13 c3qhbA_ 98.4 16 PDB header:metal transport Chain: A: PDB Molecule:symerythrin; PDBTitle: crystal structure of oxidized symerythrin from cyanophora paradoxa 14 c3fvbB_ 98.4 16 PDB header:metal binding protein Chain: B: PDB Molecule:bacterioferritin; PDBTitle: crystal structure of ferritin (bacterioferritin) from2 brucella melitensis 15 d1yv1a1 98.3 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 16 d1lkoa1 98.2 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 17 c2clbP_ 98.2 12 PDB header:metal binding protein Chain: P: PDB Molecule:dps-like protein; PDBTitle: the structure of the dps-like protein from sulfolobus2 solfataricus reveals a bacterioferritin-like di-metal3 binding site within a dps-like dodecameric assembly 18 d1jgca_ 98.2 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 19 d1j30a_ 98.2 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 20 d2oh3a1 97.9 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:AMB4284-like 21 d2fzfa1 not modelled 97.9 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 22 c1dvbA_ not modelled 97.9 17 PDB header:electron transport Chain: A: PDB Molecule:rubrerythrin; PDBTitle: rubrerythrin 23 d1yuza1 not modelled 97.8 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 24 d1nnqa1 not modelled 97.7 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 25 c2c41K_ not modelled 97.5 14 PDB header:iron-binding/oxidation protein Chain: K: PDB Molecule:dps family dna-binding stress response protein; PDBTitle: x-ray structure of dps from thermosynechococcus elongatus 26 c1yuzB_ not modelled 97.5 17 PDB header:oxidoreductase Chain: B: PDB Molecule:nigerythrin; PDBTitle: partially reduced state of nigerythrin 27 c3e6sD_ not modelled 97.4 12 PDB header:oxidoreductase Chain: D: PDB Molecule:ferritin; PDBTitle: crystal structure of ferritin soaked with iron from pseudo-2 nitzschia multiseries 28 c2hr5B_ not modelled 97.2 13 PDB header:metal binding protein Chain: B: PDB Molecule:rubrerythrin; PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form 29 d1o9ra_ not modelled 97.0 6 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 30 c2chpC_ not modelled 97.0 13 PDB header:dna-binding protein Chain: C: PDB Molecule:metalloregulation dna-binding stress protein; PDBTitle: crystal structure of the dodecameric ferritin mrga from2 b.subtilis 168 31 d1jiga_ not modelled 97.0 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 32 c3iq1A_ not modelled 97.0 11 PDB header:metal transport Chain: A: PDB Molecule:dps family protein; PDBTitle: crystal structure of dps protein from vibrio cholerae o1, a member of2 a broad superfamily of ferritin-like diiron-carboxylate proteins 33 c2d5kC_ not modelled 96.9 7 PDB header:metal binding protein Chain: C: PDB Molecule:dps family protein; PDBTitle: crystal structure of dps from staphylococcus aureus 34 d1ji5a_ not modelled 96.9 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 35 d1n1qa_ not modelled 96.9 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 36 c3bvkC_ not modelled 96.9 12 PDB header:oxidoreductase Chain: C: PDB Molecule:ferritin; PDBTitle: structural basis for the iron uptake mechanism of helicobacter pylori2 ferritin 37 c3qz3A_ not modelled 96.8 12 PDB header:oxidoreductase Chain: A: PDB Molecule:ferritin; PDBTitle: the crystal structure of ferritin from vibrio cholerae o1 biovar el2 tor str. n16961 38 d1vlga_ not modelled 96.8 17 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 39 d1vjxa_ not modelled 96.8 18 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 40 c2vxxB_ not modelled 96.8 14 PDB header:dna-binding protein Chain: B: PDB Molecule:starvation induced dna binding protein; PDBTitle: x-ray structure of dpsa from thermosynechococcus elongatus 41 d1euma_ not modelled 96.7 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 42 c3kwoA_ not modelled 96.7 14 PDB header:oxidoreductase Chain: A: PDB Molecule:putative bacterioferritin; PDBTitle: crystal structure of putative bacterioferritin from2 campylobacter jejuni 43 d1krqa_ not modelled 96.6 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 44 c3fseB_ not modelled 96.5 15 PDB header:hydrolase Chain: B: PDB Molecule:two-domain protein containing dj-1/thij/pfpi-like and PDBTitle: crystal structure of a two-domain protein containing dj-1/thij/pfpi-2 like and ferritin-like domains (ava_4496) from anabaena variabilis3 atcc 29413 at 1.90 a resolution 45 c1u7mB_ not modelled 96.5 18 PDB header:de novo protein Chain: B: PDB Molecule:four-helix bundle model; PDBTitle: solution structure of a diiron protein model: due ferri(ii)2 turn mutant 46 d1s3qa1 not modelled 96.4 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 47 c2c6rA_ not modelled 96.3 13 PDB header:dna-binding protein Chain: A: PDB Molecule:dna-binding stress response protein, dps family; PDBTitle: fe-soaked crystal structure of the dps92 from deinococcus2 radiodurans 48 d1tjoa_ not modelled 96.3 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 49 c2xgwA_ not modelled 96.0 10 PDB header:metal binding protein Chain: A: PDB Molecule:peroxide resistance protein; PDBTitle: zinc-bound crystal structure of streptococcus pyogenes dpr 50 d1vela_ not modelled 95.6 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 51 d2ib0a1 not modelled 95.6 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Rv2844-like 52 c2ib0A_ not modelled 95.6 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical alanine rich protein; PDBTitle: crystal structure of a conserved hypothetical protein, rv2844, from2 mycobacterium tuberculosis 53 c2jd8C_ not modelled 95.5 19 PDB header:metal transport Chain: C: PDB Molecule:ferritin homolog; PDBTitle: crystal structure of the zn-soaked ferritin from the2 hyperthermophilic archaeal anaerobe pyrococcus furiosus 54 d2bk6a1 not modelled 95.4 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 55 d1ji4a_ not modelled 95.3 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 56 c3q4nA_ not modelled 95.3 12 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein mj0754; PDBTitle: crystal structure of hypothetical protein mj0754 from methanococcus2 jannaschii dsm 2661 57 c3qd8M_ not modelled 95.3 14 PDB header:metal binding protein Chain: M: PDB Molecule:probable bacterioferritin bfrb; PDBTitle: crystal structure of mycobacterium tuberculosis bfrb 58 c2rbdB_ not modelled 95.0 9 PDB header:structural protein Chain: B: PDB Molecule:bh2358 protein; PDBTitle: crystal structure of a putative spore coat protein (bh2358) from2 bacillus halodurans c-125 at 1.54 a resolution 59 d2fjca1 not modelled 95.0 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 60 c2wlaA_ not modelled 94.4 10 PDB header:oxidoreductase Chain: A: PDB Molecule:dps-like peroxide resistance protein; PDBTitle: streptococcus pyogenes dpr 61 d1dpsa_ not modelled 94.0 7 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 62 c2f7nA_ not modelled 93.3 9 PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding stress response protein, dps family; PDBTitle: structure of d. radiodurans dps-1 63 d2yw6a1 not modelled 92.8 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 64 d1r03a_ not modelled 92.1 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 65 d1rcda_ not modelled 91.9 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 66 d2ceia1 not modelled 91.5 12 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 67 c1lt1G_ not modelled 91.2 15 PDB header:de novo protein Chain: G: PDB Molecule:l13g-df1; PDBTitle: sliding helix induced change of coordination geometry in a2 model di-mn(ii) protein 68 d1lb3a_ not modelled 90.9 13 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 69 c2pybC_ not modelled 89.2 8 PDB header:metal transport Chain: C: PDB Molecule:neutrophil activating protein; PDBTitle: napa protein from borrelia burgdorferi 70 d1mfra_ not modelled 89.1 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 71 c2hz8A_ not modelled 88.9 24 PDB header:de novo protein Chain: A: PDB Molecule:de novo designed diiron protein; PDBTitle: qm/mm structure refined from nmr-structure of a single2 chain diiron protein 72 d1jkva_ not modelled 88.5 9 Fold:Ferritin-like Superfamily:Ferritin-like Family:Manganese catalase (T-catalase) 73 d1umna_ not modelled 86.4 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 74 c2z90D_ not modelled 82.6 8 PDB header:dna binding protein Chain: D: PDB Molecule:starvation-inducible dna-binding protein or fine PDBTitle: crystal structure of the second dps from mycobacterium2 smegmatis 75 d1q06a_ not modelled 82.4 10 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:DNA-binding N-terminal domain of transcription activators 76 c2yjkF_ not modelled 81.1 7 PDB header:metal-binding protein Chain: F: PDB Molecule:afp; PDBTitle: structure of dps from microbacterium arborescens in the2 high iron form 77 d2za7a1 not modelled 80.8 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 78 d1q08a_ not modelled 79.4 14 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:DNA-binding N-terminal domain of transcription activators 79 d1zpya1 not modelled 65.7 10 Fold:Ferritin-like Superfamily:Ferritin-like Family:half-ferritin 80 c3bt5A_ not modelled 59.5 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein duf305; PDBTitle: crystal structure of duf305 fragment from deinococcus2 radiodurans 81 d1zuja1 not modelled 48.4 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 82 d1z72a1 not modelled 47.4 9 Fold:Heme oxygenase-like Superfamily:Heme oxygenase-like Family:TENA/THI-4 83 d1udda_ not modelled 44.1 17 Fold:Heme oxygenase-like Superfamily:Heme oxygenase-like Family:TENA/THI-4 84 d1rkta2 not modelled 40.4 13 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 85 d1cnt1_ not modelled 40.3 16 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Long-chain cytokines 86 c1o06A_ not modelled 36.6 22 PDB header:transport protein Chain: A: PDB Molecule:vacuolar protein sorting-associated protein vps27; PDBTitle: crystal structure of the vps27p ubiquitin interacting motif (uim) 87 d2cwla1 not modelled 31.5 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Manganese catalase (T-catalase) 88 d2g3ba2 not modelled 29.8 8 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 89 c3a9qR_ not modelled 27.6 16 PDB header:oxidoreductase Chain: R: PDB Molecule: PDBTitle: crystal structure analysis of e173a variant of the soybean2 ferritin sfer4 90 c2qf9B_ not modelled 27.2 11 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative secreted protein; PDBTitle: crystal structure of putative secreted protein duf305 from2 streptomyces coelicolor 91 c3oqlB_ not modelled 26.4 9 PDB header:transcription Chain: B: PDB Molecule:tena homolog; PDBTitle: crystal structure of a tena homolog (pspto1738) from pseudomonas2 syringae pv. tomato str. dc3000 at 2.54 a resolution 92 d1zs3a1 not modelled 22.4 10 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 93 c3tl8K_ not modelled 22.0 17 PDB header:transferase/ligase Chain: K: PDB Molecule:effector protein hopab2; PDBTitle: the avrptob-bak1 complex reveals two structurally similar2 kinaseinteracting domains in a single type iii effector 94 c2l5gA_ not modelled 21.7 33 PDB header:transcription regulator Chain: A: PDB Molecule:g protein pathway suppressor 2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207 95 d1uzra_ not modelled 20.0 8 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 96 c3oqlA_ not modelled 19.7 9 PDB header:transcription Chain: A: PDB Molecule:tena homolog; PDBTitle: crystal structure of a tena homolog (pspto1738) from pseudomonas2 syringae pv. tomato str. dc3000 at 2.54 a resolution 97 c1uo0A_ not modelled 18.5 48 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 98 c1uo0B_ not modelled 18.5 48 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 99 c3e0zB_ not modelled 16.9 10 PDB header:unknown function Chain: B: PDB Molecule:protein of unknown function; PDBTitle: crystal structure of a putative imidazole glycerol phosphate synthase2 homolog (eubrec_1070) from eubacterium rectale at 1.75 a resolution

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0