Return to main results Retrieve Phyre Job Id

Job DescriptionP21362
Confidence81.06%DateThu Jan 5 11:38:08 GMT 2012
Rank76Aligned Residues137
% Identity7%Templatec2yjkF_
PDB info PDB header:metal-binding proteinChain: F: PDB Molecule:afp; PDBTitle: structure of dps from microbacterium arborescens in the2 high iron form
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30. ........40.........50.........60.........70.........80..
Predicted Secondary structure  ...











Query SS confidence 

























. . .


















































Query Sequence  IEDVFIHLLSDTYSAEKQLTRALAKL. . . ARATSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEGLI
Query Conservation 
 


   
 
 
 

 
   

  
...
  
  
 

  
  
  

  

 


     

        
  
 

 
Alig confidence 

























...









































......


Template Conservation          

  

    
  
    

 
 
  
  

  


   
     
 




  


 
    ......   
Template Sequence  VAAAAAQFLTPVVHKMQALVVNGKQAHWNVRGSNFIAIHELLDSVVAHAQDYADTAAERIVALGLPIDSRV. . . . . . STM
Template Known Secondary structure  STTTT





......
Template Predicted Secondary structure 











......
Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70.........80.... ...
 
   83......90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure 





Query SS confidence 




































































Query Sequence  EEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLT
Query Conservation   
              
  

  

  





 
 

   
  

    
 

   
 

   
  
 
Alig confidence 



..





































.























Template Conservation     
..              
  
           
  
  
 
. 
  
 


  
    

  


 
Template Sequence  AEKT. . STAVPAGFAQWQDEIKAIVSDIDAALVDLQAAIDGLDE. VDLTSQDVAIEIKRGVDKDRWFLL
Template Known Secondary structure  T
..




SS
TT.T
Template Predicted Secondary structure  ..











.

Template SS confidence 




































































   88.90. ........100.........110.........120......... 130.........140.........150...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions