Job Description P21362 Confidence 96.76% Date Thu Jan 5 11:38:08 GMT 2012 Rank 40 Aligned Residues 140 % Identity 14% Template c2vxxB_ PDB info PDB header:dna-binding protein Chain: B: PDB Molecule:starvation induced dna binding protein; PDBTitle: x-ray structure of dpsa from thermosynechococcus elongatus Resolution 2.40 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		E	D	V	F	I	H	L	L	S	D	T	Y	S	A	E	K	Q	L	T	R	A	L	A	K	L	A	R	A	T	S	N	E	K	.	.	.	L	S	Q	A	F	H	A	H	L	E	E	T	H	G	Q	I	E	R	I	D	Q	V	V	E	S	E	S	N	L	K	I	K	R	M	K	C	V	A	M	E	G	L	I	E
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.																													.												.	.	.	.
Template Conservation																																																																		.												.	.	.	.
Template Sequence		T	T	P	I	C	E	G	M	N	R	L	L	A	S	F	Q	A	L	Y	L	Q	Y	Q	K	H	H	F	V	V	E	G	A	E	F	Y	P	L	H	Q	F	F	Q	D	C	Y	E	Q	V	Q	D	H	V	H	A	L	G	E	R	L	N	G	L	G	G	.	V	P	V	A	G	F	Q	Q	L	A	A	.	.	.	.
Template Known Secondary structure																																S	T	T																													T	T		.					S							.	.	.	.
Template Predicted Secondary structure																																																																		.												.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	N	E	V	I	E	S	T	E	K	N	E	V	R	D	A	A	L	I	A	A	A	Q	K	V	E	H	Y	E	I	A	S	Y	G	T	L	A	T	L	A	E	Q	L	G	Y	R	K	A	A	K	L	L	K	E	T	L	E	E	E	K	A	T	D	I	K	L	T	D	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	L	C	C	F	T	P	E	P	E	G	A	F	N	C	R	Q	M	L	S	N	D	L	Q	A	E	Q	A	I	I	G	V	L	R	Q	Q	A	T	Q	A	E	S	L	G	D	R	A	T	A	Y	L	Y	D	Q	I	L	L	K	T	E	E	R	A	Y	H	I	G	H	F
Template Known Secondary structure		.	.			S	S					S	S																																	T
Template Predicted Secondary structure		.	.
Template SS confidence
				101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions