Job Description P75825 Confidence 100.00% Date Wed Jan 25 15:21:03 GMT 2012 Rank 4 Aligned Residues 493 % Identity 20% Template d1su7a_ SCOP info Prismane protein-like Prismane protein-like Carbon monoxide dehydrogenase Resolution 1.12

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	Q	C	E	Q	T	I	R	T	P	A	G	N	G	C	S	Y	A	Q	G	M	C	G	K	T	A	E	T	S	D	L	Q	D	L	L	I	A	A	L	Q	G	L	S	A	W	A	V	K	A	R	E	Y	G	I	I	N	H	D	V	D	S	F	A	P	R	A	F	F	S	T	L	T	N	V	N	F	D	S	P
Query Conservation
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	R	H	C	L	Q	G	P	C	R	I	N	P	F	G	D	E	P	K	V	G	I	C	G	A	T	A	E	V	I	V	A	R	G	L	D	R	S	I	A	A	G	A	A	G	H	S	G	H	A	K	H	L	A	H	T	L	K	K	A	V	Q	G	K	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S	T	T							S	S	S	S	S			S		T	T	S																																						T	T	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	V	G	Y	A	R	E	A	I	A	L	R	E	A	L	K	A	Q	C	L	A	V	D	A	N	A	R	V	D	N	P	M	A	D	L	Q	L	V	S	D	D	L	G	E	L	Q	R	Q	A	A	E	F	T	P	N	K	D	K	A	A	I	G	E	N	I	L	G	L	R	L	L	C	L	Y	G	L	K	G	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.																										.											.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.																										.											.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	Y	M	I	K	D	R	T	K	L	H	S	I	A	K	R	L	G	I	.	.	.	.	.	.	.	.	.	P	T	E	G	Q	K	D	E	D	I	A	L	E	V	A	K	A	A	L	A	D	F	H	E	K	.	D	T	P	V	L	W	V	T	T	V	.	.	.	.	.	.	L	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.																	T		.	.	.	.	.	.	.	.	.			T	T																	T	T	S			.	S	S							T	T	.	.	.	.	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.																										.											.	.	.	.	.	.
Template SS confidence
											115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.										.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.							.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.																																																	.	.	.
Query SS confidence																														.																																																	.	.	.
Query Sequence		A	A	Y	M	E	H	A	H	V	L	G	Q	Y	D	N	D	I	Y	A	Q	Y	H	K	I	M	A	W	L	.	G	T	W	P	A	D	M	N	A	L	L	E	C	S	M	E	I	G	Q	M	N	F	K	V	M	S	I	L	D	A	G	E	T	G	K	Y	G	H	P	T	P	T	Q	V	N	V	K	A	.	.	.
Query Conservation																														.																																																	.	.	.
Alig confidence																														.																																																	.	.	.
Template Conservation
Template Sequence		P	S	R	V	K	V	L	S	A	H	G	L	I	P	A	G	I	D	H	E	I	A	E	I	M	H	R	T	S	M	G	C	D	A	D	A	Q	N	L	L	L	G	G	L	R	C	S	L	A	D	L	A	G	C	Y	M	G	T	D	L	A	D	I	L	F	G	T	P	A	P	V	V	T	E	S	N	L	G	V	L
Template Known Secondary structure											T	T		S		S													T	S	T	T	S																																												S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
			239	240	.	.	.	.	.	.	.	.	.	250											.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure		.													.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence		.													.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		.	T	A	G	K	C	I	L	I	S	G	H	D	.	.	.	.	.	.	.	.	.	.	L	K	D	L	Y	N	L	L	E	Q	T	E	G	T	G	V	N	V	Y	.	.	.	.	T	H	G	E	M	L	P	A	H	G	Y	P	E	L	R	K	F	K	H	L	V	G	N	Y	G	S	G	W	Q	N	Q	Q	V	E
Query Conservation		.													.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence		.													.	.	.	.	.	.	.	.	.	.																				.	.	.	.													.	.	.	.	.	.	.						.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.						.	.	.	.	.	.
Template Sequence		K	A	D	A	V	N	V	A	V	H	G	H	N	P	V	L	S	D	I	I	V	S	V	S	K	E	M	E	N	E	A	R	A	A	G	A	T	G	I	N	V	V	G	I	C	C	T	G	N	E	V	L	M	R	H	G	I	P	.	.	.	.	.	.	.	A	C	T	H	S	.	.	.	.	.	.	V	S	Q	E
Template Known Secondary structure			T	T	S							S	S															T							T	T	S	S																						.	.	.	.	.	.	.					G	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.						.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.								.	.	310	.	.							.	.	.	.
		304	.	.	.	.	.	310	.				.	.	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.							.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.										.	.	.																.														.	.	.	.	.	.																				.	.	.
Query SS confidence										.	.	.										.	.	.																.														.	.	.	.	.	.																				.	.	.
Query Sequence		F	A	R	F	P	G	P	I	.	.	.	V	M	T	S	N	C	I	I	D	.	.	.	P	T	V	G	A	Y	D	D	R	I	W	T	R	S	I	.	V	G	W	P	G	V	R	H	L	D	G	D	D	.	.	.	.	.	.	F	S	A	V	I	T	Q	A	Q	Q	M	A	G	F	P	Y	S	E	I	.	.	.
Query Conservation										.	.	.										.	.	.																.														.	.	.	.	.	.																				.	.	.
Alig confidence										.	.	.										.	.	.																.														.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		M	A	M	I	T	G	A	L	D	A	M	I	L	D	Y	Q	C	I	Q	P	S	V	A	T	I	A	E	C	T	G	T	T	V	I	T	T	M	E	M	S	K	I	T	G	A	T	H	V	N	F	A	E	E	A	A	V	E	N	A	K	Q	I	L	R	L	A	I	D	T	F	K	R	R	K	G	K	P	V	E	I
Template Known Secondary structure						T	S									S	S	S			T																	B	T	T	B			T	T	S							G	G	G																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
					368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.										.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure		.	.	.																	.	.	.	.	.	.	.	.	.																																.								.
Query SS confidence		.	.	.																	.	.	.	.	.	.	.	.	.																																.								.
Query Sequence		.	.	.	P	H	L	I	T	V	G	F	G	R	Q	T	L	L	G	A	.	.	.	.	.	.	.	.	.	A	D	T	L	I	D	L	V	S	R	E	K	L	R	H	I	F	L	L	G	G	C	D	G	A	R	G	E	R	H	Y	.	F	T	D	F	A	T	S	.	V	P	D	D	C	L	I	L	T	L	A	C
Query Conservation		.	.	.																	.	.	.	.	.	.	.	.	.																																.								.
Alig confidence		.	.	.																	.	.	.	.	.	.	.	.	.																																.								.
Template Conservation
Template Sequence		P	N	I	K	T	K	V	V	A	G	F	S	T	E	A	I	I	N	A	L	S	K	L	N	A	N	D	P	L	K	P	L	I	D	N	V	V	N	G	N	I	R	G	V	C	L	F	A	G	C	N	N	V	K	V	P	Q	D	Q	N	F	T	T	I	A	R	K	L	L	K	Q	N	V	L	V	V	A	T	G	C
Template Known Secondary structure																							T	T		T	T		T											T	S	S								S				T	T	S		B	T													T	T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		434	.	.	.	.	.	440	.	.	.																										.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.		.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Query Sequence		G	K	Y	R	F	N	K	L	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	I	E	G	L	P	R	L	V	D	A	G	Q	C	N	D	A	Y	S	A	I	I	L	A	V	T	L	A	E	K	L	G	C	G	V	N	D	L	P	L	S	L	.	V
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template Conservation
Template Sequence		G	A	G	A	L	M	R	H	G	F	M	D	P	A	N	V	D	E	L	C	G	D	G	L	K	A	V	L	T	A	I	G	E	A	N	G	L	G	G	P	L	P	P	V	L	H	M	G	S	C	V	D	N	S	R	A	V	A	L	V	A	A	L	A	N	R	L	G	V	D	L	D	R	L	P	V	V	A	S	A
Template Known Secondary structure									T	T	T	T		G	G	G					S															T	T		S	S				S						S	S	T	T																T	S		G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.			.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		L	S	W	F	E	Q	K	A	I	V	I	L	L	T	L	L	S	L	G	V	K	N	I	V	T	G	P	T	A	P	G	F	L	T	P	D	L	L	A	V	L	N	E	K	F	G	.	.	L	R	S	I	T	T	V	E	E	D	M	K	Q	L
Query Conservation																																																.	.
Alig confidence																						.																										.	.
Template Conservation																						.
Template Sequence		A	E	A	M	H	E	K	A	V	A	I	G	T	W	A	V	T	I	G	L	.	P	T	H	I	G	V	L	P	P	I	T	G	S	L	P	V	T	Q	I	L	T	S	S	V	K	D	I	T	G	G	Y	F	I	V	E	L	D	P	E	T	A
Template Known Secondary structure		T	T			S														T		.						S			T	T	T	T										T	T	T					S							S	S
Template Predicted Secondary structure																						.
Template SS confidence
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.		.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.