Job Description P75825 Confidence 35.44% Date Wed Jan 25 15:21:03 GMT 2012 Rank 20 Aligned Residues 118 % Identity 14% Template c3ijdB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: uncharacterized protein cthe_2304 from clostridium2 thermocellum binds two copies of 5-methyl-5,6,7,8-3 tetrahydrofolic acid Resolution 2.00 Å

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		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	F	G	R	Q	T	L	L	G	A	A	D	T	L	I	D	L	V	S	R	E	K	L	R	H	I	F	L	L	G	G	C	D	G	A	R	G	E	R	H	Y	F	T	D	F	A	T	S	V	P	D	D	C	L	I	L	T	L	A	C	G	K	Y	R	F	N	K	L	E	F	G	D	I	E	G	L	P	R	L
Query Conservation
Alig confidence																													.												.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.												.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	N	T	E	E	K	I	K	E	I	S	Q	K	H	I	E	R	I	S	G	L	D	I	D	G	L	.	V	I	Y	D	L	Q	I	E	T	I	D	.	.	.	P	Q	I	Y	S	E	N	Y	L	K	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	P	K	I
Template Known Secondary structure		S	S	S																		T				S			.									B			.	.	.										T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																													.												.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.																						.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	D	A	G	Q	C	N	D	A	Y	S	A	I	I	L	A	V	T	L	A	E	K	L	G	C	G	V	N	D	L	P	L	S	L	V	L	S	W	F	E	Q	K	A	I	V	I	L	L	T	L	L	S	L	G	V	K	N	I	V	T	G	P	T	A	P	G	F	L	T	P	D	L	L	A	V	L	N	E	K	.
Query Conservation																																																																																	.
Alig confidence					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																	.
Template Conservation					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		I	Y	R	.	C	V	G	K	Y	T	P	D	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	L	T	R	P	V	S	G	Q	D	A	F	S	V	F	V	G	A	.	A	V	L	L	K	L	S	D	A	Y	K	I	R	Q	D	V	N
Template Known Secondary structure					.		G	G	G	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S			T	T											.				S
Template Predicted Secondary structure					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		92	.	.		.	.	.	.	.	100	.	.	.	.																														.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
				532	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	F	G	L	R	S	I	T	T	V	E	E	D	M	K	Q
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		P	D	L	L	L	G	G	V	A	I	P	E	R	H	M	K	N
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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