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Job DescriptionP46481
Confidence7.17%DateWed Jan 25 15:20:56 GMT 2012
Rank12Aligned Residues129
% Identity15%Templated1otsa_
SCOP infoClc chloride channel Clc chloride channel Clc chloride channel
Resolution2.51

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  IRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGTAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIR
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Template Sequence  MGMLVFIFVARVITTLLCFSSGAPGGIFAPM. . . . . . . . . . . . . . . . . . . . . . . . . . . . LALGTVLGTAFGMVAVELFPQ
Template Known Secondary structure  TT
SSBS............................
GG
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   330.........340.........350.........360 .........370.........380.
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  APLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIMADLLFSPR
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Template Sequence  YH. . LEAGTFAIAGMGALLAASIRAP. . . . . . . . . LTGIILVLEMTDN. . . . . . . . YQLILPMIITGLGATLLAQFTGGK
Template Known Secondary structure  GT..

TTS

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........GGGTTT

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   382. ......390.........400..... ....410........ .420.........430.........440..
 
   171........180......
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Query Sequence  SIKQEVDRELESLLVA
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Template Sequence  PLYSAILARTLAKQEA
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   443......450........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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