Job Description P46481 Confidence 6.49% Date Wed Jan 25 15:20:56 GMT 2012 Rank 14 Aligned Residues 117 % Identity 11% Template c3nd0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sll0855 protein; PDBTitle: x-ray crystal structure of a slow cyanobacterial cl-/h+ antiporter Resolution 3.20 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	A	I	V	L	A	L	F	V	G	F	H	F	Q	L	E	T	P	R	W	A	V	L	T	A	A	I	V	A	A	G	T	A	F	A	A	G	G	E	P	Y	S	G	A	I	R	Y	R	G	F	L	R	I	I	G	T	F	I	G	C	I	A	G	L	V	I	I	I	A	M	I	R	A	P	L	L	M	I
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		V	F	C	G	R	F	L	L	T	L	I	C	Y	G	S	G	A	I	G	G	I	F	A	P	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	I	A	S	I	V	S	V	A	M	A	R	H	F	H	L	L	F	P	S	Q	I	.	.	P	E
Template Known Secondary structure																T	T		B			S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T	T		.	.	S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.																													.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	C	C	I	W	A	G	F	C	T	W	I	S	S	L	V	R	I	E	N	S	Y	A	W	G	L	A	G	Y	T	A	L	I	I	V	I	T	I	Q	P	E	P	L	L	T	P	Q	F	A	V	E	R	C	S	E	I	V	I	G	I	V	C	A	I	M	A	D	L	L	F	S	P	R	S	I	K	Q	E	V
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		P	A	V	M	A	I	A	G	M	G	A	L	V	A	A	T	V	R	A	P	.	.	.	.	.	.	.	.	.	L	T	A	I	L	L	T	I	E	M	T	D	N	Y	F	.	.	.	.	.	.	.	.	V	I	L	P	L	L	V	T	C	L	V	A	S	V	V	A	E	A	L	G	G	K	P	I	Y	T	V	L
Template Known Secondary structure		T							T	T	S								S			.	.	.	.	.	.	.	.	.										T	T				T	.	.	.	.	.	.	.	.	T																T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.										.	.	400	.	.	.	.	.	.	.	.	.	410	.	.									.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
		177	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	R	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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