Job Description P46481 Confidence 2.13% Date Wed Jan 25 15:20:56 GMT 2012 Rank 64 Aligned Residues 143 % Identity 14% Template c3iyzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:aquaporin-4; PDBTitle: structure of aquaporin-4 s180d mutant at 10.0 a resolution from2 electron micrograph Resolution 10.00 Å

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		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		F	W	R	T	T	L	S	C	I	L	G	T	L	F	W	L	W	T	G	W	T	S	G	S	G	A	M	V	M	I	A	V	V	T	S	L	A	M	R	L	P	N	P	R	M	V	A	I	D	F	I	Y	G	T	L	A	A	L	P	L	G	L	L	Y	F	L	V	I	I	P	N	T	Q	Q	S	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																										.	.	.																																																	.	.	.	.	.
Template Conservation																										.	.	.
Template Sequence		L	I	S	L	C	F	G	L	S	I	A	T	M	V	Q	C	F	G	H	I	S	G	G	H	.	.	.	I	N	P	A	V	T	V	A	M	V	C	T	R	K	I	S	I	A	K	S	V	F	Y	I	T	A	Q	C	L	G	A	I	I	G	A	G	I	L	Y	L	V	T	P	P	S	V	V	G	G	L	G	V	T
Template Known Secondary structure																			T	T	T	S				.	.	.		S											T	S	S																										T	S		G	G	G	G	G	T	T	T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
														433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.							.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.															.	.	480
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	M	L	L	L	C	I	S	L	A	V	L	G	F	F	L	G	I	E	V	Q	K	R	R	.	.	.	.	.	.	L	G	S	M	G	A	L	A	S	T	I	N	I	I	V	L	D	N	P	M	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	F	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	H	G	N	L	T	A	G	H	G	L	L	V	E	L	I	I	T	F	Q	L	V	F	T	I	F	A	S	C	D	D	K	R	T	D	V	T	G	S	V	A	L	A	I	G	F	S	V	A	I	G	H	L	F	A	I	N	Y	T	G	A	S	M	N	P	A	R	S	F	G	P	A	V	I	M	G	N	W	E
Template Known Secondary structure					T	T																											S	S	S	S			S	S													T					T	S	S	S																				T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	L	D	S	A	L	G	Q	I	V	G	C	V	L	A	F	T	V	I	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	W	I	Y	W	V	G	P	I	I	G	A	V	L	A	G	A	L	Y	E	Y	V
Template Known Secondary structure		T	T																					T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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