Job Description P0A712 Confidence 3.53% Date Wed Jan 25 15:20:16 GMT 2012 Rank 22 Aligned Residues 103 % Identity 10% Template c2xutC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:proton/peptide symporter family protein; PDBTitle: crystal structure of a proton dependent oligopeptide (pot)2 family transporter. Resolution 3.62 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	L	G	N	T	I	D	L	T	V	I	A	Q	T	G	L	L	G	I	L	L	G	V	A	V	I	I	V	T	G	I	P	L	I	I	A	D	K	L	I	G	G	G	D	G	T	A	G	I	A	A	S	S	S	A	G	A	A	V	A	T	P	V	L	I	A	E	M	V	P	A	F	K	P	M	A	P	A	A
Query Conservation
Alig confidence																												.																																		.	.	.	.	.
Template Conservation																												.																																		.	.	.	.	.
Template Sequence		L	L	L	S	I	P	E	E	L	R	G	A	V	A	K	D	V	F	H	S	F	V	I	G	V	Y	.	F	F	P	L	L	G	G	W	I	A	D	R	F	F	G	K	Y	N	T	I	L	W	L	S	L	I	Y	C	V	G	H	A	F	.	.	.	.	.	L	A	I	F	E	H	S	V	Q	G	F	Y	T	G	L
Template Known Secondary structure			S	S			S	S	S	T	T	T	T	T														.		T									T	T	S	S		S																		.	.	.	.	.				T	S	S
Template Predicted Secondary structure																												.																																		.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	V	A	T	A	V	I	V	T	S	I	L	V	P	I	L	T	S	I	W	S	R	K	V	K	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	I	A	L	G	S	G	G	I	K	P	L	V	S	S	F	M	G	D	Q	F	D	Q	S	N	K	S	L
Template Known Secondary structure										T	T											T		S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions