 |
| Job Description | P76155 | | Confidence | 5.53% | Date | Thu Jan 5 12:19:47 GMT 2012 |
| Rank | 46 | Aligned Residues | 42 |
| % Identity | 14% | Template | d1ocya_ |
| SCOP info | Receptor-binding domain of short tail fibre protein gp12
| Receptor-binding domain of short tail fibre protein gp12
| Receptor-binding domain of short tail fibre protein gp12
|
| Resolution | 1.5 |
|
| | |
37 | . | . | 40 | . | . | . | . | . | . | . | . | |
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
| Predicted Secondary structure | |
|
|
|
|
|
|  |  |
|
|
|
| . | . |
|
|
|
|
| | | | | | |
|
|
|
|
| | | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | | | |
|
|
|
|
| | | | |
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
G | L | P | A | N | S | T | D | I | A | P | P | . |
. |
D | I | P | A | G | F | V | A | V | F | N | S | D | E | S | S | W | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | V | E | D | H | R | G | K | T | V | Y | D | V | A | S | G |
| Query Conservation | |
|
|
|
| |
|
| | | |
|
| . | . | | | | |
| | | | | | | | | | | |
| | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | |
| |
| |
|
| |
| |
| |
| |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
|
| |
| | | | |
| | | | |
| |
|
|
| |
| . | . | . | . |
|
| | | | | | | |
|
| |
| | | | |
| | | |
| | | | |
|
| |
|
|
|
|
|
| |
| |
|
| |
| |
|
| Template Sequence | |
T | I | P | V | G | A | I | M | M | W | A | A | D | S | L | P | S | D | A | W | R | F | C | . |
. |
. |
. |
H | G | G | T | V | S | A | S | D | C | P | L | Y | A | S | R | I | G | T | R | Y | G | G | S | S | S | N | P | G | L | P | D | M | R | G | L | F | V | R | G | S | G | R | G |
| Template Known Secondary structure | |
 | S |
| T | T |
| | | | | S | S | S | S |
| S | S | T | T | | | | S | . | . | . | . | B | S |
| B |
|
| T | T | T |
| | | | | | | T | T | T | T | T | S | B |
| S | S | S | B | B |
|
| B |
| T | T |
|
|
|
|
| S | S |
|
|
| Template Predicted Secondary structure | |
|
|
|
|
|
| | | |
|
|
|
|
|
|
|
|
|
|
| | | | . | . | . | . |
|
|
|
|
|
| | | | | | | | | | | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | |
|
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | |
|
|
|
. | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
