Job Description P37766 Confidence 100.00% Date Thu Jan 5 11:57:34 GMT 2012 Rank 16 Aligned Residues 221 % Identity 26% Template c3rrlC_ PDB info PDB header:transferase Chain: C: PDB Molecule:succinyl-coa:3-ketoacid-coenzyme a transferase subunit a; PDBTitle: complex structure of 3-oxoadipate coa-transferase subunit a and b from2 helicobacter pylori 26695 Resolution 2.29 Å

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		13	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	P	V	L	.	S	A	Q	E	A	V	N	Y	I	P	D	E	A	T	L	C	V	L	G	A	G	G	G	I	L	E	A	T	T	L	I	T	A	L	A	D	K	Y	K	Q	T	Q	T	P	R	N	L	S	I	I	S	P	T	G	L	G	D	R	A	D	R	G	I	S	P	L	A	Q	E	G	L	V	K	W	A
Query Conservation						.
Alig confidence						.																						.															.	.	.	.	.																	.	.
Template Conservation																												.															.	.	.	.	.																	.	.
Template Sequence		N	K	V	I	T	D	L	D	K	A	L	S	A	L	K	D	G	D	T	I	L	V	G	G	F	G	.	L	C	G	I	P	E	Y	A	I	D	Y	I	Y	K	.	.	.	.	.	K	G	I	K	D	L	I	V	V	S	N	N	C	G	V	D	.	.	D	F	G	L	G	I	L	L	E	K	K	Q	I	K	K	I
Template Known Secondary structure				B		S							T	T			T	T								B	T	.	T	B	T												.	.	.	.	.		T			S						S				B	T	.	.	T	B	T	T					T	T	T
Template Predicted Secondary structure																												.															.	.	.	.	.																	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	G	H	W	G	Q	S	P	R	I	S	E	L	A	E	Q	N	K	I	I	A	Y	N	Y	P	Q	G	V	L	T	Q	T	L	R	A	A	A	A	H	Q	P	G	I	I	S	D	I	G	I	G	T	F	V	D	P	R	Q	Q	G	G	K	L	N	E	V	T	K	E	D	L	I	K	L	V	E	F	D	N	K
Query Conservation
Alig confidence										.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	S	Y	V	G	E	N	.	.	.	K	I	F	X	L	N	G	E	I	E	V	V	L	T	P	Q	G	T	L	A	E	N	L	H	A	G	G	A	G	I	P	A	Y	Y	T	P	T	G	V	G	T	L	I	A	Q	G	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	E	F	N	G	K
Template Known Secondary structure				S			T	T		.	.	.	S				T	T	S	S	S																				T							S	T	T	T	T	S	G	G	G	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure										.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.															130	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	L	Y	Y	K	A	I	A	P	D	I	A	F	I	R	A	T	T	C	D	S	E	G	Y	A	T	F	E	D	E	V	M	Y	L	D	A	L	V	I	A	Q	A	V	H	N	N	G	G	I	V	M	M	Q	V	Q	K	M	V	K	K	A	T	L	H	P	K	S	V	R	I	P	G	Y	L	V	D	I	V	V
Query Conservation
Alig confidence																																								.							.	.	.	.
Template Conservation																																								.							.	.	.	.
Template Sequence		E	Y	I	L	E	R	A	I	T	G	D	Y	G	L	I	K	A	Y	K	S	D	T	L	G	N	L	V	F	R	K	T	A	R	N	F	N	P	L	.	C	A	X	A	A	K	.	.	.	.	I	C	V	A	E	V	E	E	I	V	P	A	G	E	L	D	P	D	E	I	H	L	P	G	I	Y	V	Q	H	I	Y
Template Known Secondary structure																			S				T	T							G	G	G		T	T				.				T			.	.	.	.							S					T	T	S	S		T	T	T		S	B		G	G	G		S
Template Predicted Secondary structure																																								.							.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	P	D	Q	T	Q	L	Y	G	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	E	K	F	E	K	R	I	E	K	I
Template Known Secondary structure				S							S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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