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Job DescriptionP37766
Confidence100.00%DateThu Jan 5 11:57:34 GMT 2012
Rank2Aligned Residues443
% Identity25%Templatec1ooyA_
PDB info PDB header:transferaseChain: A: PDB Molecule:succinyl-coa:3-ketoacid-coenzyme a transferase, PDBTitle: succinyl-coa:3-ketoacid coa transferase from pig heart
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13.. ....20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  VPV. LSAQEAVNYIPDEATLCVLGAGGGILEATTLITALADKYKQTQTPRNLSIISPTGLGDRADRGISPLAQEGLVKWA
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Template Sequence  TKFYTDAVEAVKDIPNGATVLVGGFG. LCGIPENLIGALLK. . . . . TGVKELTAVSNNAGVD. . NFGLGLLLQSKQIKRM
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S
TT

TT


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   1........10.........20...... ...30.........40 .........50...... ...60.........70..
 
   92.......100.........110.........120.........130.........140.........150......... 160.......
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Query Sequence  LCGHWGQSPRISELAEQNKIIAYNYPQGVLTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTK. . . . EDLIKLVE
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Template Sequence  ISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVRE
Template Known Secondary structure  S


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TS


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   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   168.170.........180.........190.........200.........210.........220.........230.........240.......
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Query Sequence  FDNKEYLYYKAIAPDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNNGGIVMMQVQKMVKKATLHPKSVRIPGYLV
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Template Sequence  FNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKS. . . . . ARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYV
Template Known Secondary structure  TT


TTS


GG.....G
TTTTS
TTSS
GGG
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GGG
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   153......160.........170.........180....... ..190.........200.........210.........220.......
 
   248.250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  DIVVVDPDQTQLYGGAPVNRFISGDFTLDDSTKLSLPLNQRKLVARRALFEMRKGAVGNVGVGIADGIGLVAREE. . . . .
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Template Sequence  HRLVKGEKYEKRIER. . . . . . . . . . . . . . . . . . . . . . . NVRERIIKRAALEFEDGMYANLGIGIPLLASNFISPNMTVHL
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   228.230.........240.. .......250.........260.........270.........280....
 
   323......330.........340.........350.........360.........370.........380.........390..... ..
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Query Sequence  . . . . GCADDFILTVETGPIGGITSQGIAFGANVNTRAILDMTSQFDFYHGGGLDVCYLSFAEVDQHGNVGVHKFNGK. IM
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Template Sequence  QSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMIPGKLVK
Template Known Secondary structure  TTT




GGG

TT
B
TTS
B



TT
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STT


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   303......310.........320.........330.........340.........350.........360.........370.........380..
 
   398.400.........410. ........420.........430.........440.........450.........460.........470.....
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Query Sequence  GTGGFIDISATSKK. IIFCGTLTAGSLKTEITDGKLNIVQEGRVKKFIRELPEITFSGKIALERGLDVRYITERAVFTL.
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Template Sequence  GMGGAMDLVSSAKTKVVVTMEHSAKG. . . . . . . . . . . . . . . . NAHKIMEKCTLPLTG. . . . . . KQCVNRIITEKAVFDVD
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TTT

TTS

SB
GG................G
BSSS
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   383......390.........400........ .410.........420... ......430.........440
 
   476...480.........490.........500.........510....
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Query Sequence  KEDGLHLIEIAPGVDLQKDILDKMDFTPVISPELKLMDE
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Template Sequence  RKKGLTLIELWEGLTVD. DIKKSTGCDFAVSPKLIPMQQ
Template Known Secondary structure  TTT
TT

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   441........450....... ..460.........470........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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