Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU9
Confidence13.74%DateThu Jan 5 11:16:27 GMT 2012
Rank9Aligned Residues53
% Identity11%Templated1vi0a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   169170.........180.........190.........200.........210.........220.....
Predicted Secondary structure 



Query SS confidence 
























































Query Sequence  PGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTVS
Query Conservation   


 

 

  

 




      
  
       

         
        
Alig confidence 
















....



































Template Conservation     
   

  



  ....
 
  
 

  
                       
Template Sequence  HQSQVSKIAKQAGVADG. . . . TIYLYFKNKEDILISLFKEKXGQFIERXEEDIKEKA
Template Known Secondary structure  GG

TS
....
SSTT

Template Predicted Secondary structure 






....






Template SS confidence 
























































   25....30.........40. ........50.........60.........70.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions