Job Description P0ABU9 Confidence 5.42% Date Thu Jan 5 11:16:27 GMT 2012 Rank 23 Aligned Residues 74 % Identity 12% Template c2hjdA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:quorum-sensing antiactivator; PDBTitle: crystal structure of a second quorum sensing antiactivator tram2 from2 a. tumefaciens strain a6 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	R	D	N	L	T	G	S	E	Q	I	F	Y	S	G	F	K	E	F	V	R	L	H	R	A	N	S	H	A	P	E	A	V	V	E	G	A	S	R	A	M	R	I	S	M	N	R	E	L	E	N	L	E	T	H	I	P	F	L	G	T	V	G	S	I	S	P	Y	I	G	L	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	G	L	S	S	A	D	I	E	T	L	T	A	N	A	I	R	L	H	R	Q	L	L	E	K	A	D	Q	L	F	Q	V	L	P	D	D	I	K	I	G	T	A	A	G	G	E	Q	H	L	E	Y	I	E	A	M	I	E	M	H	A	Q	M	S	A	V	N	T	L	V	G	L	L	G
Template Known Secondary structure			T	T																														T	S							T	S				S																												T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions