Return to main results Retrieve Phyre Job Id

Job DescriptionP77717
Confidence16.48%DateThu Jan 5 12:32:02 GMT 2012
Rank16Aligned Residues32
% Identity13%Templatec1ux6A_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:thrombospondin-1; PDBTitle: structure of a thrombospondin c-terminal fragment reveals a2 novel calcium core in the type 3 repeats
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110........ .120.........130......
Predicted Secondary structure 









...





Query SS confidence 






















. . .

















Query Sequence  QSPFSFVLSFNPADVQPNARILL. . . SAAITVNDKLVFITDTVQ
Query Conservation 


  
 
 

   
 
  

 
... 


   




 


  
Alig confidence 












.........
...

















Template Conservation   
 
   
 


 ......... 
 

     
     


   
Template Sequence  FTAYRWRLSHRPK. . . . . . . . . TGFIRVVMYEGKKIMADSGPIY
Template Known Secondary structure  T
TT.........TTTT


Template Predicted Secondary structure 





.........





Template SS confidence 











































   1087..1090......... 1100.........1110.........1120.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions