 |
Job Description | P24188 | Confidence | 99.38% | Date | Thu Jan 5 11:41:05 GMT 2012 |
Rank | 55 | Aligned Residues | 102 |
% Identity | 16% | Template | d2gwfa1 |
SCOP info | Rhodanese/Cell cycle control phosphatase
| Rhodanese/Cell cycle control phosphatase
| Ubiquitin carboxyl-terminal hydrolase 8, USP8
|
Resolution | 2.30 |
|
 |
  |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | |
|
. | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | A | A | E | V | N | A | M | L | D | D | . |
. |
P | D | A | L | F | I | D | M | R | N | H | Y | E | Y | E | V | G | H | F | E | N | A | L | E | I | P | A | D | T | F | R | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | L | P | K | A | V | E | M | M | Q | A | H | K | D | K | K | I | V | M | Y | C | T | G |
Query Conservation |   |
|
|
|   |
|   |   |   |   |
|   |
| . | . |   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |
|
|
|   |
|
|
|   |
|   |   |   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
Template Sequence |   |
I | T | A | K | E | L | Y | T | M | M | T | D | K | N | I | S | L | I | I | M | D | A | R | R | M | Q | D | Y | Q | D | S | C | I | L | H | S | L | S | V | P | E | E | A | I | S | P | G | V | T | A | S | W | I | E | A | H | L | P | D | D | S | K | D | T | W | K | K | R | G | N | V | E | Y | V | V | L | L | D | W | F |
Template Known Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  | S | T | T | S |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  | S |
| B | T | T |
|  |  |
|
| G | G | G |
|
| T | T |
|
|  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  | T | T | T | T | S | S |  |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
  |
  |   |
203 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | . |
. |
. |
. |
. |
. |
. |
. |
I | R | C | E | K | A | S | A | W | M | K | H | N | G | F | N | . |
. |
. |
. |
. |
K | V | W | H | I | E | G | G | I | I | E | Y | A | R | K | A | R | E |
Query Conservation |   |
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|   | . | . | . | . | . |
|
|
|   |
|   |
|
|
|   |   |
|   |
|   |   |   |   |
Alig confidence |   |
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|
|   |
Template Sequence |   |
S | S | A | K | D | L | Q | I | G | T | T | L | R | S | L | K | D | A | L | F | K | W | E | S | K | T | V | L | R | N | E | P | L | V | L | E | G | G | Y | E | N | W | L | L | C | Y | P | Q |
Template Known Secondary structure |   |
|
| G | G | G |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  | T | S |
|
| S | S |
|
| S | S |
|
|  |  |  | T | T |  |  |  |  |  |  |  |  |
| G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
263 | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|