Return to main results Retrieve Phyre Job Id

Job DescriptionP24188
Confidence36.08%DateThu Jan 5 11:41:05 GMT 2012
Rank175Aligned Residues42
% Identity26%Templatec2zetD_
PDB info PDB header:signaling proteinChain: D: PDB Molecule:melanophilin; PDBTitle: crystal structure of the small gtpase rab27b complexed with2 the slp homology domain of slac2-a/melanophilin
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   267..270.........280. ........290.........300 .........310
Predicted Secondary structure 














..





...




Query SS confidence 














. .


















. . .









Query Sequence  CHQCGAPCDSHTNCK. . NDGCHLLFIQCPVCAEKYK. . . GCCSEICCEE
Query Conservation 
  
  
 
   

 ..   
  
 
 
  
  
  ...  

  
   
Alig confidence 














..





..










...









Template Conservation 
  
   
         
  
  .. 

  
         
 
  
 
 
Template Sequence  CARCLQPYRLLLNSRRQCLECSL. . FVCKSCSHAHPEEQGWLCDPCHLA
Template Known Secondary structure 
SSS

BGGG
SS


TTT

..
GGG

SSSSS
Template Predicted Secondary structure 




















..












Template SS confidence 
















































   64.....70.........80...... ...90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions