 |
Job Description | P24188 | Confidence | 23.97% | Date | Thu Jan 5 11:41:05 GMT 2012 |
Rank | 208 | Aligned Residues | 27 |
% Identity | 37% | Template | c2f6nA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:bromodomain phd finger transcription factor; |
PDBTitle: crystal structure of phd finger-linker-bromodomain fragment2 of human bptf in the free form
|
Resolution | 2.00 Å |
|
  |   |
267 | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | H | Q | C | G | A | P | C | D | S | H | T | N | C | K | N | D | G | C | H | L | L | F | I | Q | C | P | V | C | A | E | K | Y | K | G | C | C |
Query Conservation |   |
|   |   |
|   |   |
|   |
|   |   |   |
|
|   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |
|
Alig confidence |   |
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
| . |
|
|   |   |   |   |
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|
Template Sequence |   |
C | . |
I | C | K | T | P | Y | D | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | K | F | Y | I | G | C | D | R | C | Q | N | W | Y | H | G | R | C |
Template Known Secondary structure |   |
T | . | T | T | T | B |
|
|
| T | . | . | . | . | . | . | . | . | . | T | S |
|  |  |  |
| T | T | T |
|
|  |  |  | T | G | G |
Template Predicted Secondary structure |   |
 | . |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | |
. | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|